Pairwise Alignments

Query, 273 a.a., formamidopyrimidine-DNA glycosylase from Herbaspirillum seropedicae SmR1

Subject, 263 a.a., Endonuclease VIII from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score = 61.6 bits (148), Expect = 2e-14
 Identities = 66/283 (23%), Positives = 121/283 (42%), Gaps = 30/283 (10%)

Query: 1   MPELPEVEVTRRGVAPHLEGRTVSGVVMRHSGLRWPFPVGLEALLRGRVIRSTGRRGKYL 60
           MPE PE+      +   ++G+ ++ V    + L+ P+    E+ L G+++     RGK L
Sbjct: 1   MPEGPEIRRAADNLEAAIKGKPLTDVWFAFAQLK-PY----ESQLTGQLVTRIETRGKAL 55

Query: 61  LIHFDHG-TLIVHLGMSGHLRILPPGIAPQKHDHFDLEVGGQVMRMTDPRRFGAILWHDL 119
           L HF +G TL  H  + G  R++  G  PQ           +++R+        IL +  
Sbjct: 56  LTHFSNGLTLYSHNQLYGVWRVIDTGEIPQTT---------RILRVRLQTADKTILLYSA 106

Query: 120 AD------GAVEEHLLLRSLGLEPLEEKFTAREL---FRQTRGRSAPIKQVLLAGDIVVG 170
           +D        +  H  L+ +G + L+ + T  E+       R R+     +LL    + G
Sbjct: 107 SDIEMLTAEQLTTHPFLQRVGPDVLDARLTPEEVKARLLSPRFRNRQFSGLLLDQSFLAG 166

Query: 171 VGNIYASESLFKARIHPKTAAGKISLPRYERLAQAIRETLAAAIEQGGSSLRDFIAVNGQ 230
           +GN    E L++  +  +  A  ++  +   L+ A+ +    +    G +  D    +G 
Sbjct: 167 LGNYLRVEILWQVGLTGQHKAKDLNEAQLNALSHALLDIPRLSYTTRGQA--DENKHHGA 224

Query: 231 SGYFQQNYFVYNRTGEACRICATPIRQIKQGQRSTFYCVSCQK 273
              F+    +++R GEAC  C   I +     R  ++C  CQK
Sbjct: 225 LFRFK----LFHRDGEACERCGGIIEKTTLSSRPFYWCPHCQK 263