Pairwise Alignments

Query, 273 a.a., formamidopyrimidine-DNA glycosylase from Herbaspirillum seropedicae SmR1

Subject, 269 a.a., formamidopyrimidine-DNA glycosylase (NCBI) from Escherichia coli BW25113

 Score =  256 bits (653), Expect = 5e-73
 Identities = 137/274 (50%), Positives = 172/274 (62%), Gaps = 6/274 (2%)

Query: 1   MPELPEVEVTRRGVAPHLEGRTVSGVVMRHSGLRWPFPVGLEALLRGRVIRSTGRRGKYL 60
           MPELPEVE +RRG+ PHL G T+   V+R+  LRWP    +  L    V+ S  RR KYL
Sbjct: 1   MPELPEVETSRRGIEPHLVGATILHAVVRNGRLRWPVSEEIYRLSDQPVL-SVQRRAKYL 59

Query: 61  LIHFDHGTLIVHLGMSGHLRILPPGIAPQKHDHFDLEVG-GQVMRMTDPRRFGAILWHDL 119
           L+    G +I+HLGMSG LRILP  + P+KHDH DL +  G+V+R TDPRRFGA LW   
Sbjct: 60  LLELPEGWIIIHLGMSGSLRILPEELPPEKHDHVDLVMSNGKVLRYTDPRRFGAWLWTKE 119

Query: 120 ADGAVEEHLLLRSLGLEPLEEKFTARELFRQTRGRSAPIKQVLLAGDIVVGVGNIYASES 179
            +G    H +L  LG EPL + F    L ++   +   IK  L+   +VVGVGNIYASES
Sbjct: 120 LEG----HNVLTHLGPEPLSDDFNGEYLHQKCAKKKTAIKPWLMDNKLVVGVGNIYASES 175

Query: 180 LFKARIHPKTAAGKISLPRYERLAQAIRETLAAAIEQGGSSLRDFIAVNGQSGYFQQNYF 239
           LF A IHP   A  +SL   E LA+ I+  L  +IEQGG++L+DF+  +G+ GYF Q   
Sbjct: 176 LFAAGIHPDRLASSLSLAECELLARVIKAVLLRSIEQGGTTLKDFLQSDGKPGYFAQELQ 235

Query: 240 VYNRTGEACRICATPIRQIKQGQRSTFYCVSCQK 273
           VY R GE CR+C TPI   K  QR+TFYC  CQK
Sbjct: 236 VYGRKGEPCRVCGTPIVATKHAQRATFYCRQCQK 269