Pairwise Alignments

Query, 273 a.a., formamidopyrimidine-DNA glycosylase from Herbaspirillum seropedicae SmR1

Subject, 298 a.a., formamidopyrimidine-DNA glycosylase from Agrobacterium fabrum C58

 Score =  192 bits (488), Expect = 7e-54
 Identities = 122/300 (40%), Positives = 163/300 (54%), Gaps = 29/300 (9%)

Query: 1   MPELPEVEVTRRGVAPHLEGRTVSGVVMRHSGLRWPFPVGLEALLRGRVIRSTGRRGKYL 60
           MPELPEVE  RRG+AP +EG  V  + +    LR+PFP     L+ G+ I S GRR KYL
Sbjct: 1   MPELPEVETVRRGLAPAMEGARVRKLHLGRPDLRFPFPADFAGLIEGKTIISLGRRAKYL 60

Query: 61  LIHFDHG-TLIVHLGMSGHLRILPP----GIAP----------QKHDH--FDLEVGGQ-- 101
           LI  + G T++ HLGMSG  RI       G AP           KHDH  F L+ G +  
Sbjct: 61  LIELEDGLTIVSHLGMSGSFRIEAEKGEGGEAPGAFHYARSKDGKHDHVVFHLDKGEERV 120

Query: 102 VMRMTDPRRFGAILWHDLADGAVEEHLLLRSLGLEPLEEKFTARELFRQTRGRSAPIKQV 161
            +   DPRRFG    H +    ++ +     LG EP     +A  L  +  G+S P+K  
Sbjct: 121 CVIYNDPRRFG--FMHLVERNKLDLYPAFAELGPEPTGNALSADYLASRFEGKSQPLKST 178

Query: 162 LLAGDIVVGVGNIYASESLFKARIHPKTAAGKISLPRYERLAQ------AIRETLAAAIE 215
           LL   I+ G+GNIY  E+L++A + P  AAG +   R +  AQ       IR+ +A AI 
Sbjct: 179 LLDQKIIAGLGNIYVCEALWRAHLSPLRAAGTLVTTRGKPKAQLIDLTEKIRDVIADAIA 238

Query: 216 QGGSSLRDFIAVNGQSGYFQQNYFVYNRTGEACRI--CATPIRQIKQGQRSTFYCVSCQK 273
            GGSSLRD I  +G  GYFQ ++ VY++ G+ CR   C   + ++ Q  RSTFYC +CQK
Sbjct: 239 AGGSSLRDHIQTDGTLGYFQHSFSVYDQEGQPCRTPGCGGTVERVVQAGRSTFYCAACQK 298