Pairwise Alignments

Query, 285 a.a., nucleotide-binding protein from Herbaspirillum seropedicae SmR1

Subject, 284 a.a., Hypothetical ATP-binding protein UPF0042, contains P-loop from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  231 bits (588), Expect = 2e-65
 Identities = 130/287 (45%), Positives = 177/287 (61%), Gaps = 13/287 (4%)

Query: 1   MRIVLITGISGSGKSVALHVLEDAGYFCVDNLPPSLLCDLVQTRIQEGASRLAVATDARS 60
           M +++++G SGSGKSVAL  LED G++CVDNLP  LL DL +T      S  AV+ D R+
Sbjct: 1   MVLMIVSGRSGSGKSVALRALEDMGFYCVDNLPVVLLPDLARTLADRQISA-AVSIDVRN 59

Query: 61  ADSLATLRHDIDQLRADGHDVKVFFLTASSETLITRFSETRRSHPLSHRLLPGGNPSDRL 120
                 +              ++ FL A   TLI R+S+TRR HPLS         S  L
Sbjct: 60  MPESPEIFEQAMNNLPGAFSPQLLFLDADRNTLIRRYSDTRRLHPLS---------SKNL 110

Query: 121 TLSECIELEKEMLADMQE-IGLVMDTSQLSSNKLRGWIKD-LVDLERSPLTLLIESFAFK 178
           +L   I+ E ++L  ++    L++DTS++S ++L   ++  L+      LT++ ESF FK
Sbjct: 111 SLESAIDKESDLLEPLRSRADLIVDTSEMSVHELAEMLRTRLLGKRERELTMVFESFGFK 170

Query: 179 HGLPLDADLVFDVRMLPNPHYDLALRPLTGRDQPVIDFLDADAEVAEMFNDIRRFVEKWL 238
           HG+P+DAD VFDVR LPNPH+D  LRP+TG D+PV  FLD   EV       R ++E WL
Sbjct: 171 HGIPIDADYVFDVRFLPNPHWDPKLRPMTGLDKPVAAFLDRHTEVHNFIYQTRSYLELWL 230

Query: 239 PSFKGDNRSYLTVAIGCTGGQHRSVYLAERLASHFRAT-EQVVCRHR 284
           P  + +NRSYLTVAIGCTGG+HRSVY+AE+LA +FR+  + V  RHR
Sbjct: 231 PMLETNNRSYLTVAIGCTGGKHRSVYIAEQLADYFRSRGKNVQSRHR 277