Pairwise Alignments

Query, 524 a.a., ubiquinone biosynthesis protein UbiB from Herbaspirillum seropedicae SmR1

Subject, 524 a.a., ubiquinone biosynthesis protein from Agrobacterium fabrum C58

 Score =  287 bits (734), Expect = 8e-82
 Identities = 165/428 (38%), Positives = 246/428 (57%), Gaps = 8/428 (1%)

Query: 48  APRGERLRRALEDLGPIFIKFGQVLSTRRDLMPPDIANELTLLQDRVPPFDSELAVKQIE 107
           A R +RL  A+E LGP ++K GQ L+TR D++  D A++L  LQDR+  F +  A   IE
Sbjct: 53  AQRSDRLAVAVERLGPSYVKMGQFLATRPDVVGADFADDLASLQDRMAFFPAAAAKANIE 112

Query: 108 KSLGAHPDLLFATFERTPVASASIAQVHFA---TLKDGKEVAVKVLRPGMRDIIDHDIGL 164
            SLG     L+  F   P+A+ASIAQVH A   T K  ++VAVKV+RPG+R    +D+  
Sbjct: 113 GSLGRSISELYREFG-DPIAAASIAQVHPAMVDTPKGPRKVAVKVIRPGVRQRFQNDLEA 171

Query: 165 MHVAADWLERLWADGRRLKAKEVVGEFDKYLHDELDLMREAANASQLRRNFAESTLLMVP 224
           M++ AD  +R     RRL+  EV    ++    E+DL  EAA  S+L  N  +     VP
Sbjct: 172 MYLIADLQQRFVRSARRLRPVEVTRTLEQTTKIEMDLRLEAAALSELAENTRQDPGFRVP 231

Query: 225 EMYWDYCSPSVIVMERMHGIPISQTERLRAEGVDLSKLSRDGVEIFFTQVFRDGFFHADM 284
           E+ W+     V+ ME + G+ +S  E L+A G DL+KL+   ++ F     RDGFFHADM
Sbjct: 232 EVDWERTGRDVVTMEWIDGVKMSDIEGLKAAGHDLNKLADTLIQSFLRHTLRDGFFHADM 291

Query: 285 HPGNILVSVAPESFGRYIALDFGIVGTLNDFDKDYLSQNFLAFFRRDYKRVAEAHIESGW 344
           HPGN+ V    ++ G  +A+D GI G L   ++ +L++    F  RDY RVAE H E+G+
Sbjct: 292 HPGNLFV----DAKGEIVAVDMGIAGRLGKKERRFLAEILYGFITRDYMRVAEVHFEAGY 347

Query: 345 APKDTRVDELEAAVRACCEPIFDRPLKDISFGQVLLRLFQTSRRFNVEVQPQLVLLQKTL 404
            P          A+RA  EPI  +P + IS G++L  LF+ +  F++E +P+LV+LQKT+
Sbjct: 348 VPGHHDKASFAQAIRAIGEPIHGQPAETISMGKLLTLLFEVTELFDMETRPELVMLQKTM 407

Query: 405 LNVEGLGRQLDPDLDLWKTAKPYLERWMSEQIGWRGFVEQLKVEVPRYSRLLPELPRLAH 464
           + VEG+ R L+P  ++WK A P +  W+ + +G +     LK  V    +L   +P +A 
Sbjct: 408 VVVEGVSRMLNPRFNMWKAADPVVGGWIRDNLGPKRIATDLKDGVKAALKLAEAVPEIAA 467

Query: 465 QALTRYTE 472
           +    ++E
Sbjct: 468 KTEKLHSE 475