Pairwise Alignments

Query, 216 a.a., amino acid ABC transporter permease from Herbaspirillum seropedicae SmR1

Subject, 217 a.a., ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

 Score =  221 bits (563), Expect = 8e-63
 Identities = 107/199 (53%), Positives = 143/199 (71%)

Query: 12  LLQAAVWTVVLSLVAFVFGGVAGFVIALWRVSPNAVLRGIASGYIQVVQGIPLLVILFVA 71
           LL A  WTVVLSL+AFV GG+ G ++   R+            Y+Q+ QG PLL+ LF+A
Sbjct: 13  LLMALRWTVVLSLIAFVGGGIVGALLLFLRLRGGRFANRAVGLYVQLFQGTPLLMQLFLA 72

Query: 72  YFGLAIAGFKLTPLVAAGISFAIYCAAFLGEIWRGCIQAVPKTQWEASECLGFNRFEQLT 131
           YFG+A+ G  ++   AA ++  +Y +AFL EIWRGC+ ++PK QWEAS  L  +  EQ+ 
Sbjct: 73  YFGIALFGIDVSAWTAASVALTLYTSAFLAEIWRGCVASIPKGQWEASGSLALSFGEQMR 132

Query: 132 KVILPQAVKIATPPTVGFMVQIVKNTSLASVIGFVDLSRAGQIINNSTFQPFTVFGCVAL 191
            VILPQAVKIA  PTVGF+VQ++K T+LASVIGFV+L++AG +I+N+TF+PF VF CVAL
Sbjct: 133 HVILPQAVKIAIAPTVGFLVQVIKGTALASVIGFVELTKAGSMISNATFKPFVVFSCVAL 192

Query: 192 IYFCLCFPLSALSKHFERK 210
           +YF LCFP+S  +K  ERK
Sbjct: 193 LYFVLCFPVSLYAKTLERK 211