Pairwise Alignments

Query, 216 a.a., amino acid ABC transporter permease from Herbaspirillum seropedicae SmR1

Subject, 218 a.a., ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

 Score =  265 bits (677), Expect = 5e-76
 Identities = 127/213 (59%), Positives = 165/213 (77%)

Query: 4   FSFLHVEYLLQAAVWTVVLSLVAFVFGGVAGFVIALWRVSPNAVLRGIASGYIQVVQGIP 63
           F+F H+ YL+QA  WT+VLS +AFV G V GF + L R+SP   LR  A  YI+ +QGIP
Sbjct: 6   FTFTHLMYLVQAIGWTLVLSAIAFVLGAVGGFGLMLARISPRPWLRWFAVVYIECIQGIP 65

Query: 64  LLVILFVAYFGLAIAGFKLTPLVAAGISFAIYCAAFLGEIWRGCIQAVPKTQWEASECLG 123
           LL++LF+ YFGL++ G  L  LVAAG++  IY +A+LG+IWRGCI+A+PK QWEASECL 
Sbjct: 66  LLILLFIVYFGLSVYGLSLPSLVAAGLAMMIYVSAYLGDIWRGCIEAMPKPQWEASECLA 125

Query: 124 FNRFEQLTKVILPQAVKIATPPTVGFMVQIVKNTSLASVIGFVDLSRAGQIINNSTFQPF 183
            +R++ L  VI+PQAV+++ PPTVGF+VQI+K TSLASVIGFV+L+RAGQIINN+ FQPF
Sbjct: 126 LSRWQTLRLVIIPQAVRLSLPPTVGFLVQIIKMTSLASVIGFVELTRAGQIINNTIFQPF 185

Query: 184 TVFGCVALIYFCLCFPLSALSKHFERKLNVSHR 216
            VF  V   YF LC+PLS  S+  E+KLNV++R
Sbjct: 186 LVFFLVGAFYFALCYPLSRWSEAMEKKLNVANR 218