Pairwise Alignments

Query, 344 a.a., ABC transporter substrate-binding protein from Herbaspirillum seropedicae SmR1

Subject, 337 a.a., C4-dicarboxylate ABC transporter from Magnetospirillum magneticum AMB-1

 Score =  149 bits (376), Expect = 1e-40
 Identities = 90/291 (30%), Positives = 158/291 (54%), Gaps = 7/291 (2%)

Query: 14  LKTASVASAAAATGLVSTSAHAAE---FTFKYANNLPVTHPMNARAKEMAAAIAEQSKGR 70
           +K  ++ + A A  +++ SA A +      K+++ +    P    A+       E++KGR
Sbjct: 1   MKLGTLIAGAIAACVLAGSAMAQQAQPIVIKFSHVVAPDTPKGKGAEYFKKLAEERTKGR 60

Query: 71  IELQLYPNNQLGTDTDMLSQVRAGAIDFFTLSPLILGTL-VPAAQISGIGFAFKDYSQVW 129
           +++++YPN+QL  D + +  ++ GA+     S    G L V   ++  + + F     + 
Sbjct: 61  VKVEVYPNSQLYKDKEEMEALQLGAVQMLAPSLAKFGPLGVKEFEVFDLPYIFPSKDVLR 120

Query: 130 PAMDGELGAHVRKQIEARSTLFAFEKIWDNGYRQITNSTKPIKVAEDLKGMKLRVPPSPL 189
               G +GA + K++E +  +      WDNG++ I ++ KPIK   DLKG+K+R+  S +
Sbjct: 121 SVTGGPVGASLLKKLEGKGIIGL--AYWDNGFK-IMSANKPIKAPSDLKGVKMRIQSSKV 177

Query: 190 WTSMFKAFDAAPTSINFAEVYSALQTKIVEGQENPMAIISTAKLYEVQKYCSITNHMWDG 249
             +  +A  A P  + F+EVY ALQT +V+G ENP + + T K++EVQK+ ++TNH + G
Sbjct: 178 LDAEMRALGALPQVMAFSEVYQALQTGVVDGTENPPSNMYTQKMHEVQKHATMTNHGYLG 237

Query: 250 FWFLGNKKSFERLPKDLQELMTRIINEAGVNQRADVRKLNDSLVDEMKGKG 300
           +  + NKK +E LP D++  +   ++EA V   A  +  ND  V  MK  G
Sbjct: 238 YAVIVNKKFWEGLPADIRATLEGAMSEASVFANAIAQTENDDAVKAMKASG 288