Pairwise Alignments

Query, 627 a.a., ABC transporter permease from Herbaspirillum seropedicae SmR1

Subject, 429 a.a., TRAP transporter large permease from Fusobacterium nucleatum SB010

 Score =  200 bits (509), Expect = 9e-56
 Identities = 130/428 (30%), Positives = 226/428 (52%), Gaps = 17/428 (3%)

Query: 203 YNLIVFFVLLIGVCVAGGIPIAFAF-GTATMAYLALATTAPLMIVVSRMDEGMSSLILLS 261
           Y +IV FVL         IPIAFA  G+A   ++ L TT  + +V+ +    + S   L+
Sbjct: 5   YPVIVLFVLFFL-----NIPIAFALMGSALFYFIFLNTTMSMDMVIQQFVTSVESFPYLA 59

Query: 262 VPLFVLLGSLLEMSGLAKTLIDFMAALLGHVRGGLQYV--LLGAMFLVSGISGSKAADMA 319
           VP F+++GS++  SG+++ L++    L GH++GGL  V  LL AM  + GISGS  AD A
Sbjct: 60  VPFFIMVGSVMNYSGISEELMNMAEVLAGHMKGGLAQVNCLLSAM--MGGISGSANADAA 117

Query: 320 AIAPALFPEMKKRGSKPEELVALLSSSGAMTETIPPSLVLITIGAVCSVSITALFIGGLM 379
             +  L PEM K+G   E   A+ ++S A++  IPP   LI    + +V +  +F+ G  
Sbjct: 118 MESKILVPEMIKKGFSKEFSAAVTAASSAVSPVIPPGTNLILYALIANVPVGDMFLAGYT 177

Query: 380 PAAIATIAIAVVCWMRARR---EPMPDVKRAPLSLIVKALIAAIPALALPMLIRVAVIEG 436
           P  + T A+ V  ++ +++   +P  +    P+ ++ +A I +I ALA+P  I + +  G
Sbjct: 178 PGILMTAAMMVTVYIISKKRGYKPSRERMARPVEILRQA-IKSIWALAIPFGIIMGMRIG 236

Query: 437 VATATEVATIGVAYTVVVGLIMHLFMRHLSFKRLYPMLIESAALSGAILLIIGMATAMAW 496
           V T TE   + V +  +VG  ++   + L    +  +L+E+   +GA+++II  A    +
Sbjct: 237 VFTPTEAGGVAVFFCFLVGFFIY---KKLKLHHIPIILMETVKSTGAVMIIIASAKVFGY 293

Query: 497 ALTQSGFSAKLVALMQGVPGGGVGFLLITIVIFIVLGSLLEGIPAIVLFGPLLFPVARSL 556
            +T       +   +       +  L++  V+ + +G  +EG  A+V+  PLL P  + L
Sbjct: 294 YMTLERIPQFITNSLMNFTDNKLVLLMVINVLLLFVGMFIEGGAALVILAPLLVPAVKEL 353

Query: 557 GVHDVHYAMVVILAMGIGLFAPPFGVGFYAACAIGKVSPDGVFNRVWGYLAALVVALLVV 616
           GV  +H+ ++ I+ + IG   PPFG   +  C+I  V  +     VW ++ AL+V LL+V
Sbjct: 354 GVDPLHFGVIFIVNIMIGGLTPPFGSMMFTVCSIVGVRLEAFIKEVWPFIVALLVVLLLV 413

Query: 617 AFVPWISI 624
            +   I++
Sbjct: 414 TYSESIAL 421