Pairwise Alignments

Query, 627 a.a., ABC transporter permease from Herbaspirillum seropedicae SmR1

Subject, 426 a.a., ABC transporter permease from Agrobacterium fabrum C58

 Score =  213 bits (543), Expect = 1e-59
 Identities = 121/426 (28%), Positives = 223/426 (52%), Gaps = 8/426 (1%)

Query: 200 MGNYNLIVFFVLLIGVCVAGGIPIAFAFGTATMAYLALATTAPLMIVVSRMDEGMSSLIL 259
           M  + LI FF L +      G+P+A A   A++  L L T+ P+ ++   M   M+S +L
Sbjct: 1   MSVFLLIAFFGLSML-----GVPLAIALALASVGTLWLFTSMPMDLLSQTMFSSMNSFLL 55

Query: 260 LSVPLFVLLGSLLEMSGLAKTLIDFMAALLGHVRGGLQYVLLGAMFLVSGISGSKAADMA 319
           ++VPLF+L+G+++E   +A+ + DF  A++G + GGL +V + +  + SG+SGS  AD+A
Sbjct: 56  VAVPLFILVGTVMERGRVAERIFDFAEAMVGWLPGGLGHVNVISSVIFSGVSGSSVADIA 115

Query: 320 AIAPALFPEMKKRGSKPEELVALLSSSGAMTETIPPSLVLITIGAVCSVSITALFIGGLM 379
           ++       M++ G      V +   +  ++  IPPS++++  G++ +VSI  L I GL+
Sbjct: 116 SVGAIEIKAMERHGFPKGYAVGMTLCTSTLSSIIPPSILIVIAGSIANVSIGTLLIAGLV 175

Query: 380 PAAIATIAIAVVCWMRARREPMPDVKRAPLSLIVKALIAAIPALALPMLIRVAVIEGVAT 439
           P     +A  V     +              L+V   + AI  +  P+++ + +  G+ T
Sbjct: 176 PGLFIALAFLVFNHFYSVHYGYNPPTPFNFRLVVVTGLRAILPMLTPLILIIGIASGLFT 235

Query: 440 ATEVATIGVAYTVVVGLIMHLFMRHLSFKRLYPMLIESAALSGAILLIIGMATAMAWALT 499
            TE A I V Y  V+G+I++   R L  + L  +LI +A +SG IL I   +   AW  T
Sbjct: 236 PTEAAAIAVVYVAVLGVIVY---RTLPVRELPEILISTARISGTILFIAATSQLAAWVFT 292

Query: 500 QSGFSAKLVALMQGVPGGGVGFLLITIVIFIVLGSLLEGIPAIVLFGPLLFPVARSLGVH 559
             G   ++  L++ +  G +  +L+  V  +++G  +E IPA+ +  P+L P   +LG+ 
Sbjct: 293 FDGLPEQVAELLKAMNLGPMTGMLVIFVFLLIIGIFMEAIPAMFILIPVLMPPVEALGID 352

Query: 560 DVHYAMVVILAMGIGLFAPPFGVGFYAACAIGKVSPDGVFNRVWGYLAALVVALLVVAFV 619
            +H+ +V ++ + +GL  PP GV  +AA  +  +  + V       +  L +A+  +   
Sbjct: 353 PIHFLIVTVMTLTLGLVTPPVGVCLFAAAQVANMKIEDVIRGSLAPMTVLTLAIFALVLF 412

Query: 620 PWISIG 625
           P +++G
Sbjct: 413 PILTLG 418