Pairwise Alignments

Query, 627 a.a., ABC transporter permease from Herbaspirillum seropedicae SmR1

Subject, 425 a.a., hypothetical protein from Agrobacterium fabrum C58

 Score =  218 bits (556), Expect = 3e-61
 Identities = 129/420 (30%), Positives = 227/420 (54%), Gaps = 18/420 (4%)

Query: 205 LIVFFVLLIGVCVAGGIPIAFAF---GTATMAYLALATTAPLMIVVSRMDEGMSSLILLS 261
           L VF   L+G  +A G+P+AF+    G   M Y+ +  TA   I+   M  G  +  LL+
Sbjct: 3   LFVFVGSLLGA-MAIGVPVAFSLMFCGVVLMWYMGMFNTA---IIAQNMISGADTFTLLA 58

Query: 262 VPLFVLLGSLLEMSGLAKTLIDFMAALLGHVRGGLQYVLLGAMFLVSGISGSKAADMAAI 321
           +P F+L G L+   GL++ +IDF  AL+GH+RGGL  V + A  +++ ISGS AAD AA+
Sbjct: 59  IPFFILAGELMNSGGLSRRIIDFAIALVGHIRGGLGIVAIVAAIIMASISGSAAADTAAL 118

Query: 322 APALFPEMKKRGSKPEELVALLSSSGAMTETIPPSLVLITIGAVCSVSITALFIGGLMPA 381
           A  L P M K G        L+++ G +   IPPS+  I  G   +VSIT LF+ G++P 
Sbjct: 119 AAILIPMMAKAGYNIPRSGGLIAAGGIIAPVIPPSMAFIVFGVAANVSITQLFLAGIVPG 178

Query: 382 AIATIAIAVVCWMRARREPMPDVKRAPLSLIVKALIAAIP---ALALPMLIRVAVIEGVA 438
            +  I++ ++ W+   R+   ++K  P +   + L+A +    AL +P++I   +  G+ 
Sbjct: 179 ILMGISL-IIAWLIVVRK--DNIKPLPKTSGKERLVATVRAGWALGMPVIILGGIKAGIM 235

Query: 439 TATEVATIGVAYTVVVGLIMHLFMRHLSFKRLYPMLIESAALSGAILLIIGMATAMAWAL 498
           T TE A +   Y + VG++++   R L    L+ +L+ +A  +  I+ ++  A   AW +
Sbjct: 236 TPTEAAVVAAGYALFVGMVIY---RELKPADLFHVLLRAAKSTSIIMFLVCAALVSAWLI 292

Query: 499 TQSGFSAKLVALMQGVPGGGVGFLLITIVIFIVLGSLLEGIPAIVLFGPLLFPVARSLGV 558
           T +    ++   ++ +    +  ++  +V+  ++G+ L+  P I++  P+L P+ +  G+
Sbjct: 293 TAANIPNEVAGYIEPLIDRPMLLMVAMMVLVFIVGTALDLTPTILILTPVLMPIVKQAGI 352

Query: 559 HDVHYAMVVILAMGIGLFAPPFGVGFYAACAIGKVSPDGVFNRVWGYLAA--LVVALLVV 616
             V++ ++ I+   IGL  PP GV       +G++    V   VW +L A  +V+ALLV+
Sbjct: 353 DPVYFGVLFIINNAIGLITPPVGVVLNVVSGVGRIPLGKVTIGVWPFLVAETIVLALLVI 412