Pairwise Alignments

Query, 233 a.a., hypothetical protein from Herbaspirillum seropedicae SmR1

Subject, 220 a.a., hypothetical protein from Agrobacterium fabrum C58

 Score =  155 bits (391), Expect = 8e-43
 Identities = 103/230 (44%), Positives = 130/230 (56%), Gaps = 10/230 (4%)

Query: 1   MSSIAQNLQHVQQQIAAAAERAGRPAGAVQLLAVSKTFGPQAVLEAVRAGQRAFGENYLQ 60
           M  I   L+ V+Q+IA  AE++GR A  V L+AVSKTF  +A+   + AGQR FGEN +Q
Sbjct: 1   MMEIEARLEDVRQRIADVAEKSGRKAADVALVAVSKTFDAEAIQPVIDAGQRVFGENRVQ 60

Query: 61  EALEKIAALPLLAPDVPLQWHFIGPIQSNKTRPIAEHFDWVHSVDRLKIAQRLSEQRPAA 120
           EA  K  AL     D+ L  H IGP+QSNK       FD V S+DR KIA+ LSE+    
Sbjct: 61  EAQGKWPALKEKTSDIEL--HLIGPLQSNKAADAVALFDVVESIDREKIARALSEECARQ 118

Query: 121 LGALNVCLQVNISGEDSKSGLDPAELPAVAAQVAQLPGLKLRGLMAIPAPSEDVTQQRAA 180
             +L   +QVN   E  K+G+DP E  A  A       L + GLM IP   E+     A 
Sbjct: 119 GRSLRFYVQVNTGLEPQKAGIDPRETVAFVAFCRDELKLPVEGLMCIPPAEENPGPHFA- 177

Query: 181 FAAVRSLLAQLQAQGLALDTLSMGMSADLDAAVAEGASIVRIGSAIFGAR 230
                 LLA+L  Q   L+ LSMGMS D + AV  GA+ VR+GSAIFG+R
Sbjct: 178 ------LLAKLAGQ-CGLEKLSMGMSGDFETAVEFGATSVRVGSAIFGSR 220