Pairwise Alignments

Query, 437 a.a., glycerol-3-phosphate ABC transporter substrate-binding protein from Herbaspirillum seropedicae SmR1

Subject, 421 a.a., sugar ABC transporter substrate-binding protein from Agrobacterium fabrum C58

 Score = 90.9 bits (224), Expect = 7e-23
 Identities = 89/364 (24%), Positives = 148/364 (40%), Gaps = 33/364 (9%)

Query: 3   MMKTLIATGVLATITSSAF---AATAITWWHSMTGALGERVNALADDFNKTQGDYKIVPV 59
           M +  +  G++A  ++ AF    A  I +W  +     + ++ L  +F K   D  +  V
Sbjct: 5   MRRATLFAGLVAGFSTFAFNAAQAVEIEYWQYVFDTRVKAMDELIAEFQKANPDITVKQV 64

Query: 60  YKGTYDESMSAAIAAYRAGNAPAILQVFEVGTATMIYAKGAVKPVYEVMHQAGEKFDQNA 119
               Y +  +  IAA  +G  P ++Q+F  G      A G ++P+ +      +   ++ 
Sbjct: 65  -TFPYADYQTRVIAANLSGKGPDVMQLF-YGWLDKFAAGGILQPLPKDAFPHDKI--ESE 120

Query: 120 YVPAVAG------YYSTPKGMMSFPFNSSTTIMFYNKDMFAKAGLDPEKPPVTWQEFVGM 173
           + P V+       YY  P  + S         +FYNK +F +AGLD   PP T  EFV  
Sbjct: 121 FFPIVSAMKRGDDYYGLPTAVRSLA-------LFYNKKLFTEAGLDAANPPKTLDEFVAA 173

Query: 174 AAKIKASGAACAYTTTWQSWVHLESFSTWHNVELATKNNG--FGGLDARLKMNSPLHVRH 231
           A KI    AA   T    +         W    L  +  G  +   D ++  NS   ++ 
Sbjct: 174 AEKIAKHDAAGNLTVAGSTLDMGGQDHQWWREVLIRQYGGEPYADNDQKVTYNSEPGIQA 233

Query: 232 IENLSNWAKQGYFTYAGRKDEANAKFNAGECAIITGSSSAYADIRKNAKFKFGVATLPYY 291
           ++  ++   +      G  DE  A F AG+  +    +      R    F++GV  LP  
Sbjct: 234 LKFYTSLQLEKKIGQVGFMDEGQAAFRAGKAGMTIDGTFRLGSFRTIKDFEWGVTELP-T 292

Query: 292 NDVQGAPQNTVIGGASLWVMNGKKA----DEYKGVAKFFSYLSKPEVAAKWHQDTGYLPV 347
           ND        +    + +  NG  A    +E +   KF +Y+S PE  A W +  G LP 
Sbjct: 293 ND------KNIRSNYASYFANGISAKTTGEELEASKKFLAYISSPEAMAIWLKTVGELPA 346

Query: 348 TKAA 351
            ++A
Sbjct: 347 RRSA 350



 Score = 25.8 bits (55), Expect = 0.003
 Identities = 11/18 (61%), Positives = 14/18 (77%)

Query: 416 DSAVKRGDELLARFEKAN 433
           D+ VK  DEL+A F+KAN
Sbjct: 39  DTRVKAMDELIAEFQKAN 56