Pairwise Alignments

Query, 437 a.a., glycerol-3-phosphate ABC transporter substrate-binding protein from Herbaspirillum seropedicae SmR1

Subject, 410 a.a., sugar ABC transporter substrate-binding protein from Agrobacterium fabrum C58

 Score = 81.6 bits (200), Expect = 4e-20
 Identities = 87/328 (26%), Positives = 146/328 (44%), Gaps = 30/328 (9%)

Query: 12  VLATITSSAFAATA----ITWWHSMTGALGERVNALADDFNKTQGDYKIVPVYKGTYDES 67
           VLA++++ A AA A    +T W S+   +    N L  +FN      KI    +  +D+ 
Sbjct: 13  VLASVSAGAMAAHAEDVTLTLW-SLDRDIQPAPN-LIKEFNALNNGIKI-EYRQLQFDDV 69

Query: 68  MSAAIAAYRAGNAPAILQVFEVGTATMIYAKGAVKPVYEVMHQAGEKFDQNAYVPAVAGY 127
           +S ++ AY  GNAP I+ +     A M  ++GA   V +++ ++     +N Y P     
Sbjct: 70  VSESMRAYSTGNAPDIIAIDNPNHA-MFASRGAFLDVTDMIAKSDVIKTEN-YFPGPLKS 127

Query: 128 YSTPKGMMSFPFNSSTTIMFYNKDMFAKAGLDPEKPPVTWQEFVGMAAKIKASGAACAYT 187
            +        P  ++T  ++YNKD+F  AGLD  KPP TW E V  A K+  + A   Y 
Sbjct: 128 VTWDGKYFGVPKATNTIALYYNKDLFKAAGLDAAKPPQTWDELVDAARKL-TNPAKNVYG 186

Query: 188 TTWQSWVHLE---SFSTWHNVELATKNNGFGGLDARLKMNSPLHVRHIENLSNWAKQGYF 244
            ++ +  + E    F  W  +  AT  N          +N+   V+ +E       +   
Sbjct: 187 ISFSAKANEEGTFQFLPWAQMAGATYKN----------INTDGAVKALETWKTLLDEKLA 236

Query: 245 ---TYAGRKDEANAKFNAGECAIITGSSSAYADIRKNAKFKFGVATLPYYNDVQGAPQNT 301
              T    + ++ A FNAG  A+          + K+AKF +GV  LP       AP+++
Sbjct: 237 SPDTLTRSQWDSTATFNAGNAAMAISGPWEIDRMLKDAKFDWGVTLLPV--PTPDAPRSS 294

Query: 302 VIGGASLWVMNGKK--ADEYKGVAKFFS 327
            +G  +  + +  K  A+ +K +  F S
Sbjct: 295 AMGDYNWAIFSKTKHPAEAFKAIEFFAS 322