Pairwise Alignments

Query, 881 a.a., DNA gyrase subunit A from Herbaspirillum seropedicae SmR1

Subject, 906 a.a., DNA gyrase subunit A from Agrobacterium fabrum C58

 Score =  786 bits (2030), Expect = 0.0
 Identities = 427/921 (46%), Positives = 594/921 (64%), Gaps = 77/921 (8%)

Query: 17  MRKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMHEMNNVWNRPFVKCARVVGEVMGK 76
           M++SYLDYAMSVIV RALPDVRDGLKPVHRR+LY M E+   WN+ +VKCARV G+VMGK
Sbjct: 1   MQRSYLDYAMSVIVSRALPDVRDGLKPVHRRILYGMSELGIDWNKKYVKCARVTGDVMGK 60

Query: 77  YHPHGDASIYDTLVRMAQDFSLRYTLVDGQGNFGSIDGDGAAAMRYTECRLDKISNELLA 136
           +HPHG+++IYD L RMAQD+SLR  L+DGQGNFGSIDGD  AA RYTECRL+K ++ LL 
Sbjct: 61  FHPHGNSAIYDALARMAQDWSLRLPLIDGQGNFGSIDGDPPAAERYTECRLEKAAHSLLD 120

Query: 137 DIEKETVDFVPNYDGKEKEPSVLPTRIPNLLVNGSSGIAVGMATNIPPHNITEVINGALH 196
           D++KETVDF  NYDG  +EP V+P + PNLLVNG+ GIAVGMATNIPPHN++EVI+G + 
Sbjct: 121 DLDKETVDFRDNYDGTLQEPVVVPAKFPNLLVNGAGGIAVGMATNIPPHNLSEVIDGCVA 180

Query: 197 LLANEQCTIDELIELVPAPDFPTGGIIYGVSGVRDGYRTGRGRVVMRAKTHFEEYGREGR 256
           L+ N    + E+++++P PDFPTG +I G SG+R  Y TGRG V+MR     E   R  R
Sbjct: 181 LIENPAIELPEMMQIIPGPDFPTGALIMGRSGIRSAYETGRGSVIMRGVATIEPM-RGDR 239

Query: 257 IAIIVDELPYQVNKKALLERIAELVRDKKLEGISDLRDESDKSGMRVVIELKRGEVPEVV 316
             II+ E+PYQVNK +++E++AELV++K++EGISDLRDESD+ G RVVIELKR    EV+
Sbjct: 240 EQIIITEVPYQVNKASMIEKMAELVKEKRIEGISDLRDESDRQGYRVVIELKRDANAEVI 299

Query: 317 LNNLYKQTQLQDTFGMNMVALVDGQPRLLNLKQLLECFLSHRREVVTRRTVFELRKARER 376
           LN LY+ T LQ +FG NMVAL  G+P  + L  +L  F+S R +VV+RRT + LRKAR+R
Sbjct: 300 LNQLYRYTPLQTSFGCNMVALNGGKPEQMTLLDMLRAFVSFREDVVSRRTKYLLRKARDR 359

Query: 377 GHVLEGLAVALANIDDFIAIIRAAPTPPIAKAELMSRAWDSSMVREMLARAGEANEGGIE 436
            HVL GLA+++ANID+ I +IR AP P  A+ +LM+R W +  V  ++    +       
Sbjct: 360 AHVLVGLAISVANIDEVIRVIRHAPDPASAREQLMTRRWPAQDVESLIRLIDD------- 412

Query: 437 AFRPESLPAHYGIQSDGLYKLSDEQAQEILQMRLQRLTGLEQDKIVNEYKDVMAQIADLL 496
                  P H  I  DG Y LS+EQA+ IL++RL RLT L +D+I +E   + A+I++ L
Sbjct: 413 -------PRH-RINEDGTYNLSEEQARAILELRLARLTALGRDEIGDELNKIGAEISEYL 464

Query: 497 DILAKPARVTAIITDELNAAKNDFGIGAKDERRSTIEHNATDLATEDLITPQDMVVTLSH 556
           DIL+   R+  I+ DEL + +++FG      RRS I     D+  EDLI  +DMVVT+SH
Sbjct: 465 DILSSRVRIQQIVKDELVSIRDEFG----TPRRSQIVEGGPDMDDEDLIAREDMVVTVSH 520

Query: 557 TGYMKSQPVSEYRAQKRGGRGKQAMATKDDDWIDQLFIANTHDYILCFSNRGRLYWLKVW 616
            GY+K  P++ YRAQ+RGG+G+  MAT+D+D++++LF+ANTH  +L FS+RG +Y  KVW
Sbjct: 521 LGYIKRVPLTTYRAQRRGGKGRSGMATRDEDFVNRLFVANTHTPVLFFSSRGIVYKEKVW 580

Query: 617 EVPQGSRNSRGKPIVNMFPLQDGEKITVILPVSGANRSFPDDRYVFMATSLGTVKKTPLS 676
            +P G+  S+GK ++NM PL+ GE+IT I+P+     ++ +   V  +T+ GTV++  L 
Sbjct: 581 RLPIGTPQSKGKALINMLPLEPGERITTIMPLPEDETAW-ETLDVMFSTTRGTVRRNKLG 639

Query: 677 DFSNPRKAGIIAVDLD-EGDFLIGAALTDGQHDVMLFSDGGKAVRFDENDVRPM-GRTAR 734
           DF    + G IA+ LD EGD ++       + DV+L +  G+ +RF  +DVR   GR + 
Sbjct: 640 DFVQVNRNGKIAMKLDEEGDEILSVETCTDRDDVLLTTALGQCIRFPVDDVRVFAGRNSV 699

Query: 735 GVRGMNLEETQQVIAL-----------------------------------LVAEN---- 755
           GVRG+N+ E  ++I++                                   LV E     
Sbjct: 700 GVRGINMAEGDRIISMTIVGHVEAEPWERAAYLKRSATERRAAGVDEEDIALVGEEVTEE 759

Query: 756 -------------EQQSVLTATENGFGKRTPITEYTRHGRGTKGMIAIQTSERN--GKVV 800
                         ++ VLT +  GFGKR+   ++   GRG KG+ A  T++ N  G++V
Sbjct: 760 GELSEERYQELKAREEFVLTVSVKGFGKRSSSYDFRTSGRGGKGIRATDTAKTNEIGELV 819

Query: 801 AATLVDSTDEIMLITTGGVLIRTRVSEIREMGRATQGVTLIAVEDGTKLSGLQRVVESDV 860
           AA  V+  D+IML++ GG LIR  V+ IR   RAT+GVT+ +     K+  ++R+ E + 
Sbjct: 820 AAFPVEEGDQIMLVSDGGQLIRVPVNGIRIASRATKGVTIFSTAKDEKVVSVERINEPEG 879

Query: 861 EDAVEGDNAEGAGSEAPAAGE 881
           +D  E  N + A    P A E
Sbjct: 880 DDEAENGNDDEADDNLPDAPE 900