Pairwise Alignments

Query, 300 a.a., LysR family transcriptional regulator from Herbaspirillum seropedicae SmR1

Subject, 300 a.a., LysR family transcriptional regulator YnfL from Pseudomonas fluorescens GW456-L13

 Score =  178 bits (451), Expect = 2e-49
 Identities = 113/294 (38%), Positives = 165/294 (56%), Gaps = 11/294 (3%)

Query: 1   MELRHLRYFLTVAEELHFARAAEVLGIAPPTLSVQIQQLERQLQAQLFVRGKRAIALTSA 60
           MELRHLRYF+ VAEELHF RAA+VLGI+ P LS QIQ LE+++ A+LF R  R + L+ A
Sbjct: 1   MELRHLRYFIAVAEELHFGRAAQVLGISQPPLSQQIQALEQEVGARLFERTNRRVELSEA 60

Query: 61  GEDFVVQARAVLARFEQAIDAGRRAGRGEMGRVEVGYVGSAVFGGILQQQLSAFRQRWPQ 120
           G  F+ +AR VLA+ ++A D  RRA  GE+G +++G+  SA F   + Q + +FRQR+P 
Sbjct: 61  GRLFLEEARLVLAQVDKAADVARRAQLGELGELKIGFTSSAPFNSTIPQAIFSFRQRFPA 120

Query: 121 VLVHAREWPMLQLGAALEEGKLDIAFVRLPVPLGQTLQSHVLLRDRFCLALPTDHAL--A 178
           V ++ RE    Q+  AL +  +++  +R P+ L   L    L+R+     L + H L   
Sbjct: 121 VHLNLREMSSTQVADALVDESIEVGIMR-PLGLPDCLSVVELMREPLVAVLSSKHPLVEG 179

Query: 179 SKPGAIRSRALAGEDFILPEQELGS------REVWRRGGFAPRRVSRPGGLLAVLAEVAV 232
           S+ G   S ALA E F+   +  GS        + R  GF+P      G  + ++  VA 
Sbjct: 180 SEEGLFLS-ALALEPFVFFPRSYGSGLYAQLLSLARDSGFSPHFAQEAGEAMTIIGLVAA 238

Query: 233 GAGVAVVPGVLTTVVNLPNVSYRALAGAAVVSEVAAVYRRFERAPAVRNMIAAL 286
           G GV+V+P      + +  V YR L   A VS V  V R+ +++P  R  +  L
Sbjct: 239 GLGVSVLPASYQR-MRIDGVVYRPLLDPAAVSAVWLVQRKDQKSPMARAFVELL 291