Pairwise Alignments

Query, 300 a.a., LysR family transcriptional regulator from Herbaspirillum seropedicae SmR1

Subject, 296 a.a., transcriptional regulator, LysR family from Pseudomonas syringae pv. syringae B728a ΔmexB

 Score =  166 bits (420), Expect = 6e-46
 Identities = 106/287 (36%), Positives = 155/287 (54%), Gaps = 9/287 (3%)

Query: 1   MELRHLRYFLTVAEELHFARAAEVLGIAPPTLSVQIQQLERQLQAQLFVRGKRAIALTSA 60
           MELRHLRYF+ VAEELHF RAA+ LGI+ P LS QIQ LE++L  +LF R  R + L+ +
Sbjct: 1   MELRHLRYFIAVAEELHFGRAAQALGISQPPLSQQIQTLEQELGTRLFERTNRRVELSES 60

Query: 61  GEDFVVQARAVLARFEQAIDAGRRAGRGEMGRVEVGYVGSAVFGGILQQQLSAFRQRWPQ 120
           G  F+ +AR VLA+ ++A D  RRA  GE+G +++G+  SA F   + Q + AFRQ  P 
Sbjct: 61  GRLFLDEARLVLAQVDKATDVARRAQLGEIGELKIGFTSSAPFTSSIPQAIFAFRQACPD 120

Query: 121 VLVHAREWPMLQLGAALEEGKLDIAFVRLPVPLGQTLQSHVLLRDRFCLALPTDHALASK 180
           V +   E    ++ A LE+  + +  +R P+ L  +L    LL +     +  DH LA++
Sbjct: 121 VHLTLTEITSQEVAAGLEDKTIQVGIMR-PLALPDSLVVFELLSEPLVAIMRADHPLAAE 179

Query: 181 -PGAIRSRALAGEDFILPEQELGS------REVWRRGGFAPRRVSRPGGLLAVLAEVAVG 233
               I   ALA E F+   +  GS        + R  GF+P      G ++ ++  VA G
Sbjct: 180 SEEGIYMAALAAEPFVFFPRTYGSGIYAQVLSLARAAGFSPLITQEAGEVMTIIGLVAAG 239

Query: 234 AGVAVVPGVLTTVVNLPNVSYRALAGAAVVSEVAAVYRRFERAPAVR 280
            GV V+P      + +  V YR +      S V  V R+ E++P  R
Sbjct: 240 LGVTVLPASYRR-MRIDGVVYRNVLDPGATSAVWLVQRKDEQSPMAR 285