Pairwise Alignments

Query, 300 a.a., LysR family transcriptional regulator from Herbaspirillum seropedicae SmR1

Subject, 297 a.a., predicted DNA-binding transcriptional regulator (NCBI) from Escherichia coli BW25113

 Score =  152 bits (384), Expect = 9e-42
 Identities = 99/288 (34%), Positives = 154/288 (53%), Gaps = 10/288 (3%)

Query: 1   MELRHLRYFLTVAEELHFARAAEVLGIAPPTLSVQIQQLERQLQAQLFVRGKRAIALTSA 60
           +ELRHLRYF+ VAEELHF RAA  L I+ P LS QIQ LE+Q+ A+L  R  R++ LT+A
Sbjct: 3   IELRHLRYFVAVAEELHFGRAAARLNISQPPLSQQIQALEQQIGARLLARTNRSVLLTAA 62

Query: 61  GEDFVVQARAVLARFEQAIDAGRRAGRGEMGRVEVGYVGSAVFGGILQQQLSAFRQRWPQ 120
           G+ F+  +R +L+  + A     R  +GE G + +G+  SA F   +   LS FR+ +P 
Sbjct: 63  GKQFLADSRQILSMVDDAAARAERLHQGEAGELRIGFTSSAPFIRAVSDTLSLFRRDYPD 122

Query: 121 VLVHAREWPMLQLGAALEEGKLDIAFVRLPVPLGQTLQSHVLLRDRFCLALPTDHALASK 180
           V +  RE    +  A L EG LD+  +R    L ++L+  V++ +     +P DH LA+ 
Sbjct: 123 VHLQTREMNTREQIAPLIEGTLDMGLLR-NTALPESLEHAVIVHEPLMAMIPHDHPLANN 181

Query: 181 PGAIRSRALAGEDFILPEQELGS------REVWRRGGFAPRRVSRPGGLLAVLAEVAVGA 234
           P  +    LA E F+  +  +G+        + RR    P      G  + ++  V+ G 
Sbjct: 182 PN-VTLAELAKEPFVFFDPHVGTGLYDDILGLMRRYHLTPVITQEVGEAMTIIGLVSAGL 240

Query: 235 GVAVVPGVLTTVVNLPNVSYRALAGAAVVSEVAAVY-RRFERAPAVRN 281
           GV+++P      V L  + +  +A    VSE+  V+ +  E++PA RN
Sbjct: 241 GVSILPASFKR-VQLNEMRWVPIAEEDAVSEMWLVWPKHHEQSPAARN 287