Pairwise Alignments

Query, 1242 a.a., nitrate reductase A subunit alpha from Herbaspirillum seropedicae SmR1

Subject, 792 a.a., Anaerobic dimethyl sulfoxide reductase chain A (EC 1.8.99.-) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score = 67.4 bits (163), Expect = 5e-15
 Identities = 72/285 (25%), Positives = 113/285 (39%), Gaps = 53/285 (18%)

Query: 43  DKVVRSTHGVNCTGSCSWKVYVKNGLITWETQQTDYPRTRPD--LPNHEP--RGCPRGAS 98
           +KVV++    +C G C  + +V +G++T  +       TRPD  L    P  R C RG +
Sbjct: 53  EKVVQTCSTFDCGGKCDIRAHVSDGIVTRIS-------TRPDNALDAQMPVMRACVRGRA 105

Query: 99  YSWYVYSAQRVKYPMIRGRLMKLWQEARKTMEPVQAWAAITGDAAKAQHYKSVRGLGGFV 158
           Y  +VY   R+KYPM R                                    RG G F 
Sbjct: 106 YRKFVYHPDRLKYPMKR---------------------------------VGKRGEGKFE 132

Query: 159 RTDWETANEIIAAANAHTIKEYGP-DRVVGF-SPIPAMSMVSYAAGARYLSLIGGVPLSF 216
           R  W+ A  +IA       ++YGP  R V   + +   +        R L+L GG   S+
Sbjct: 133 RISWDEATTLIADNLKSITEKYGPASRYVHVGTAVSGGTFSGDKMARRLLNLTGGYLESY 192

Query: 217 YDWYC-DLPPASPQVWGEQTDVPESADWYNAGYLMVWGSNVPLTRTPDAH---FYTEVRY 272
           +     +   A+P  +G            +   +++WG N   T T   H   F  +++ 
Sbjct: 193 HSVSMGNTAAATPYTYGIAASGSSLDTLLDTKLVILWGHNP--TETIFGHTNYFLQKMKQ 250

Query: 273 KGTKTVAVSSDFGEMV-KFGDIWLAPRQGTDAALAMAMGHVVLKE 316
            GT+ + V   + + V    D W+     TD AL  AM +V++ E
Sbjct: 251 NGTRFIVVDPRYSDTVSSLADQWIPLLPTTDNALMDAMMYVIISE 295



 Score = 32.7 bits (73), Expect = 1e-04
 Identities = 22/80 (27%), Positives = 37/80 (46%), Gaps = 2/80 (2%)

Query: 1081 KEIVLNFLTPHQKWGIHSTYSDNLRMLTLSRGGPHVWISEDDARRAGLVDNDWVEVFNSN 1140
            K+  L  +T   K   +ST   N  ++ + +    +WI+  DA++ G+   D V + NS 
Sbjct: 669  KDFPLQLITWKGKNRANSTQYANPWLIEVQQ--QTLWINPQDAQKRGITHGDMVRIHNSR 726

Query: 1141 GTLTARVVVSQRIPGGMCLM 1160
            G       V+ RI  G+  M
Sbjct: 727  GICEIPAEVTPRIIPGVVAM 746



 Score = 32.3 bits (72), Expect = 2e-04
 Identities = 16/72 (22%), Positives = 40/72 (55%), Gaps = 1/72 (1%)

Query: 760 EGKLDLLVTLDFRMSTTCLYADIVLPTATWYEKDDL-NTSDMHPFIHPLSEAVQPLWDSK 818
           E K+  +V  D  M+ +  YAD++LP  ++ E+ ++  T     ++    + ++P ++ +
Sbjct: 490 ESKIQFIVASDLFMTPSAKYADLLLPETSFMERWNIGETWGTASYLILSEKLIEPEFERR 549

Query: 819 TDWEIYKALAKK 830
           +D++  + +A K
Sbjct: 550 SDYDWLREVAAK 561



 Score = 30.0 bits (66), Expect = 8e-04
 Identities = 23/82 (28%), Positives = 35/82 (42%), Gaps = 5/82 (6%)

Query: 498 DDLPYTPAWQEKHTGVKRELVIQVAREFAQNAHDTEGRSMVILGAALNHWYHNDMIYRGI 557
           D +  +P W EK T V  + + Q+AR++A         + +I G         +   RG 
Sbjct: 334 DGVVKSPEWAEKITHVPAQTIRQLARDYANTK-----PAALIQGWGPQRHNCGERTARGS 388

Query: 558 INLLMMCGCIGKSGGGWAHYVG 579
             L  + G +G  GG  A Y G
Sbjct: 389 TLLATITGNVGIKGGWAAGYGG 410