Pairwise Alignments

Query, 1242 a.a., nitrate reductase A subunit alpha from Herbaspirillum seropedicae SmR1

Subject, 1246 a.a., nitrate reductase 2 (NRZ), alpha subunit from Escherichia coli BL21

 Score = 1721 bits (4456), Expect = 0.0
 Identities = 813/1246 (65%), Positives = 989/1246 (79%), Gaps = 27/1246 (2%)

Query: 1    MSHFLDRLKFMSRVKSTFANGHGAVVNEDRQWENAYRSRWQHDKVVRSTHGVNCTGSCSW 60
            MS  LDR ++  +   TFA+GHG V++ +R WE++YR RWQ DK+VRSTHGVNCTGSCSW
Sbjct: 1    MSKLLDRFRYFKQKGETFADGHGQVMHSNRDWEDSYRQRWQFDKIVRSTHGVNCTGSCSW 60

Query: 61   KVYVKNGLITWETQQTDYPRTRPDLPNHEPRGCPRGASYSWYVYSAQRVKYPMIRGRLMK 120
            K+YVKNGL+TWE QQTDYPRTRPDLPNHEPRGCPRGASYSWY+YSA R+KYP+IR RL++
Sbjct: 61   KIYVKNGLVTWEIQQTDYPRTRPDLPNHEPRGCPRGASYSWYLYSANRLKYPLIRKRLIE 120

Query: 121  LWQEARKT-MEPVQAWAAITGDAAKAQHYKSVRGLGGFVRTDWETANEIIAAANAHTIKE 179
            LW+EA K   +PV AWA+I  D  K   YK VRG GGF+R++W+  N++IAAAN  TIK 
Sbjct: 121  LWREALKQHSDPVLAWASIMNDPQKCLSYKQVRGRGGFIRSNWQELNQLIAAANVWTIKT 180

Query: 180  YGPDRVVGFSPIPAMSMVSYAAGARYLSLIGGVPLSFYDWYCDLPPASPQVWGEQTDVPE 239
            YGPDRV GFSPIPAMSMVSYAAG RYLSL+GG  LSFYDWYCDLPPASP  WGEQTDVPE
Sbjct: 181  YGPDRVAGFSPIPAMSMVSYAAGTRYLSLLGGTCLSFYDWYCDLPPASPMTWGEQTDVPE 240

Query: 240  SADWYNAGYLMVWGSNVPLTRTPDAHFYTEVRYKGTKTVAVSSDFGEMVKFGDIWLAPRQ 299
            SADWYN+ Y++ WGSNVP TRTPDAHF+TEVRYKGTKT+A++ D+ E+ K  D WLAP+Q
Sbjct: 241  SADWYNSSYIIAWGSNVPQTRTPDAHFFTEVRYKGTKTIAITPDYSEVAKLCDQWLAPKQ 300

Query: 300  GTDAALAMAMGHVVLKEFHLERPSPYFRSYVKQYTDLPMLVRLVERD-GRYLPEHLLRAS 358
            GTD+ALAMAMGHV+LKEFHL+ PS YF +Y ++Y+D+PMLV L  RD G Y+P  ++RAS
Sbjct: 301  GTDSALAMAMGHVILKEFHLDNPSDYFINYCRRYSDMPMLVMLEPRDDGSYVPGRMIRAS 360

Query: 359  QLPGQLEEANNADWKTLAIDAATGEIVAPNGSIGYRWGEGQVNDGAKVGRWNLESRDGHS 418
             L   L E+NN  WKT+A++ A GE+V PNGSIG+RWGE         G+WNLES    +
Sbjct: 361  DLVDGLGESNNPQWKTVAVNTA-GELVVPNGSIGFRWGEK--------GKWNLESIA--A 409

Query: 419  GREIDPLLSLVEAHDEVVAVSFNYFGGDDAEQ--------LLERRVPVRHVRLANGSTAR 470
            G E +  L+L+  HD V  V+F YFGG +           +L R++PV+++ L +G+T  
Sbjct: 410  GTETELSLTLLGQHDAVAGVAFPYFGGIENPHFRSVKHNPVLVRQLPVKNLTLVDGNTCP 469

Query: 471  VATVHDLMMANYGVDQGLGGD-VPRSYDDDLPYTPAWQEKHTGVKRELVIQVAREFAQNA 529
            V +V+DL++ANYG+D+GL  +   + Y +  PYTPAW E+ TGV R+ +  +AREFA  A
Sbjct: 470  VVSVYDLVLANYGLDRGLEDENSAKDYAEIKPYTPAWGEQITGVPRQYIETIAREFADTA 529

Query: 530  HDTEGRSMVILGAALNHWYHNDMIYRGIINLLMMCGCIGKSGGGWAHYVGQEKLRPQFGW 589
            H T GRSM+ILGA +NHWYH DM YRG+IN+L+ CGC+G+SGGGWAHYVGQEKLRPQ GW
Sbjct: 530  HKTHGRSMIILGAGVNHWYHMDMNYRGMINMLIFCGCVGQSGGGWAHYVGQEKLRPQTGW 589

Query: 590  APLAFATDWVRPPRQMNSTSFFYAHTSQWRHEKLGLDEIVAPTADHDKLAAMSMIDMNAK 649
             PLAFA DW RPPRQMNSTSFFY H+SQWR+EK+   E+++P AD  K +   +ID N +
Sbjct: 590  LPLAFALDWNRPPRQMNSTSFFYNHSSQWRYEKVSAQELLSPLADASKYSG-HLIDFNVR 648

Query: 650  SERMGWLPSAPQLETNPLDVCDAAQAAGQSPQDYLKAALKSGAVNMSCDDPDNPKNFPRN 709
            +ERMGWLPSAPQL  NPL +   A  AG SP ++   ALKSG + M+C+ PD+  N PRN
Sbjct: 649  AERMGWLPSAPQLGRNPLGIKAEADKAGLSPTEFTAQALKSGDLRMACEQPDSSSNHPRN 708

Query: 710  MFVWRSNILGSSGKGHEYFLKYLLGTQNALFDD---AAEAIRPSEVKYREQAAEGKLDLL 766
            +FVWRSN+LGSSGKGHEY  KYLLGT++ +  +   A++ I+P EV+++  A EGKLDLL
Sbjct: 709  LFVWRSNLLGSSGKGHEYMQKYLLGTESGIQGEELGASDGIKPEEVEWQTAAIEGKLDLL 768

Query: 767  VTLDFRMSTTCLYADIVLPTATWYEKDDLNTSDMHPFIHPLSEAVQPLWDSKTDWEIYKA 826
            VTLDFRMS+TCL++DIVLPTATWYEKDD+NTSDMHPFIHPLS AV P W+S++DWEIYK 
Sbjct: 769  VTLDFRMSSTCLFSDIVLPTATWYEKDDMNTSDMHPFIHPLSAAVDPAWESRSDWEIYKG 828

Query: 827  LAKKFSEIGGEHLGTRSDIVLQPLMHDTPAELGQPFEPKDWKKGECDLIPGKTAPNFVVV 886
            +AK FS++   HLG  +D+VLQPL+HD+PAEL QP E  DW+KGECDLIPGKTAPN V V
Sbjct: 829  IAKAFSQVCVGHLGKETDVVLQPLLHDSPAELSQPCEVLDWRKGECDLIPGKTAPNIVAV 888

Query: 887  ERNYRDIYKKFTSVGPLLDKLGNGGKGINWNTEHEVGELAGLNKRVTEAGVSQGRPRLDT 946
            ER+Y   Y++FTS+GPL+DKLGNGGKGI+WNT+ E+  L  LN    + G +QGRP +DT
Sbjct: 889  ERDYPATYERFTSLGPLMDKLGNGGKGISWNTQDEIDFLGKLNYTKRD-GPAQGRPLIDT 947

Query: 947  AIDACEMILTFAPETNGHVSVKAWEALGKITGRDHTHLAVGREHDKIRLRDVQAQPRKII 1006
            AIDA E+IL  APETNGHV+VKAW+ALG+ITGR+HTHLA+ +E +KIR RD+QAQPRKII
Sbjct: 948  AIDASEVILALAPETNGHVAVKAWQALGEITGREHTHLALHKEDEKIRFRDIQAQPRKII 1007

Query: 1007 SAPTWSGLESEEVSYNAGYTNVHEYIPWRTLTGRQQFYQDHRWMLDFGEGLCVYKPAIDT 1066
            S+PTWSGLES+ VSYNAGYTNVHE IPWRTL+GRQQ YQDH WM  FGE L  Y+P IDT
Sbjct: 1008 SSPTWSGLESDHVSYNAGYTNVHELIPWRTLSGRQQLYQDHPWMRAFGESLVAYRPPIDT 1067

Query: 1067 KTVAPMLNRHPNGEKEIVLNFLTPHQKWGIHSTYSDNLRMLTLSRGGPHVWISEDDARRA 1126
            ++V+ M    PNG  E  LNFLTPHQKWGIHSTYS+NL MLTLSRGGP VWISE DAR  
Sbjct: 1068 RSVSEMRQIPPNGFPEKALNFLTPHQKWGIHSTYSENLLMLTLSRGGPIVWISETDAREL 1127

Query: 1127 GLVDNDWVEVFNSNGTLTARVVVSQRIPGGMCLMYHAQEKIVNTPGAQLSGQRGGIHNSV 1186
             +VDNDWVEVFN+NG LTAR VVSQR+P GM +MYHAQE+I+N PG++++G RGGIHNSV
Sbjct: 1128 TIVDNDWVEVFNANGALTARAVVSQRVPPGMTMMYHAQERIMNIPGSEVTGMRGGIHNSV 1187

Query: 1187 TRAVLKPTHMIGGYAQLSYGFNYYGTVGSNRDEFIVLRKMNKVDWL 1232
            TR   KPTHMIGGYAQL++GFNYYGTVGSNRDEFI++RKM  V+WL
Sbjct: 1188 TRVCPKPTHMIGGYAQLAWGFNYYGTVGSNRDEFIMIRKMKNVNWL 1233