Pairwise Alignments

Query, 156 a.a., transcription antitermination protein NusB from Herbaspirillum seropedicae SmR1

Subject, 166 a.a., transcription antitermination protein from Pseudomonas putida KT2440

 Score =  110 bits (276), Expect = 8e-30
 Identities = 60/152 (39%), Positives = 79/152 (51%)

Query: 4   KTQHANSNKNRTPRHRAREFALQGLYQWLLNHEDAGAIEAHIREAHGFDKADAEHFDTLL 63
           K   A        R  AR+ A Q LYQW +       IEA  R  + F   D  +F  +L
Sbjct: 15  KPADAGKPSKSAKRREARKLATQALYQWHMAQHSLNEIEAQFRVDNDFTDVDGAYFREIL 74

Query: 64  TGAIRDAEKLRAGLAPLIDRPIKELSPVEHAALLIGAYELQNHIEIPYKVVINEAVELTK 123
            G      ++   L P +   ++EL PVE A L +  +EL   +++PY+VVINE VEL K
Sbjct: 75  HGVPAIKGEIDKALVPCMTIALEELDPVELAVLRLSTWELIKRVDVPYRVVINEGVELAK 134

Query: 124 SFGGIDGHKYVNGVLDRFAAQTRATEVEAAGR 155
            FG  DGHK+VNGVLD+ A   R  EV+A  R
Sbjct: 135 VFGATDGHKFVNGVLDKLAPALREAEVKANKR 166