Pairwise Alignments

Query, 156 a.a., transcription antitermination protein NusB from Herbaspirillum seropedicae SmR1

Subject, 139 a.a., Transcription termination protein NusB from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  103 bits (256), Expect = 1e-27
 Identities = 54/130 (41%), Positives = 72/130 (55%)

Query: 17  RHRAREFALQGLYQWLLNHEDAGAIEAHIREAHGFDKADAEHFDTLLTGAIRDAEKLRAG 76
           R RARE A+Q LY W L+  D   +E            D  +F  LL+G   ++  L   
Sbjct: 6   RRRARECAVQALYSWQLSQNDIADVEYQFLAEQDVKDVDVLYFRELLSGVATNSAYLDGL 65

Query: 77  LAPLIDRPIKELSPVEHAALLIGAYELQNHIEIPYKVVINEAVELTKSFGGIDGHKYVNG 136
           + P + R ++EL  VE A L I  +EL    ++PYKV INEA+EL K+FG  D HK+VNG
Sbjct: 66  MKPYLSRLLEELGQVEKAVLRIALFELSKRSDVPYKVAINEAIELAKTFGAEDSHKFVNG 125

Query: 137 VLDRFAAQTR 146
           VLD+ A   R
Sbjct: 126 VLDKAAPVIR 135