Pairwise Alignments

Query, 156 a.a., transcription antitermination protein NusB from Herbaspirillum seropedicae SmR1

Subject, 139 a.a., transcription antitermination protein from Escherichia coli BL21

 Score =  105 bits (261), Expect = 4e-28
 Identities = 56/130 (43%), Positives = 70/130 (53%)

Query: 17  RHRAREFALQGLYQWLLNHEDAGAIEAHIREAHGFDKADAEHFDTLLTGAIRDAEKLRAG 76
           R RARE A+Q LY W L+  D   +E            D  +F  LL G   +   L   
Sbjct: 6   RRRARECAVQALYSWQLSQNDIADVEYQFLAEQDVKDVDVLYFRELLAGVATNTAYLDGL 65

Query: 77  LAPLIDRPIKELSPVEHAALLIGAYELQNHIEIPYKVVINEAVELTKSFGGIDGHKYVNG 136
           + P + R ++EL  VE A L I  YEL    ++PYKV INEA+EL KSFG  D HK+VNG
Sbjct: 66  MKPYLSRLLEELGQVEKAVLRIALYELSKRSDVPYKVAINEAIELAKSFGAEDSHKFVNG 125

Query: 137 VLDRFAAQTR 146
           VLD+ A   R
Sbjct: 126 VLDKAAPVIR 135