Pairwise Alignments

Query, 924 a.a., pseudouridine synthase from Herbaspirillum seropedicae SmR1

Subject, 451 a.a., peptidase M16 from Pseudomonas simiae WCS417

 Score =  137 bits (346), Expect = 1e-36
 Identities = 110/420 (26%), Positives = 191/420 (45%), Gaps = 21/420 (5%)

Query: 57  EYRFANGFKLLLLPDDSQPTVTVNITYLVGSRHENYGETGMAHLLEHLMFKGSPRHPSIP 116
           E+   NG K+++  D   P V   + Y VGS +E  G+TG++H LEH+MFKGS +     
Sbjct: 32  EFTLDNGLKVVVREDHRAPVVVSQVWYKVGSSYETPGQTGLSHALEHMMFKGSAKVGPGE 91

Query: 117 QDFSKR--GMNFNGTTWLDRTNYYETFQASPDNLRWAIAMEADRMLNSKIARKDLDSEMT 174
                R  G   N  T  D T YY+    + D L  A  +EADRM + ++   +   E+ 
Sbjct: 92  ASLILRDLGAEENAFTSDDYTAYYQVL--ARDRLGVAFELEADRMASLRLPADEFSREIE 149

Query: 175 VVRNEFE-AGETSPTRVMLKRMQSVAYDWHAYGRNTIGARSDIENVRIENLQAFYRTYYQ 233
           V++ E     + +P     +R +++A+    Y   TIG  +D++ +++E L+ +Y+++Y 
Sbjct: 150 VIKEERRLRTDDNPMSKAYERFKAMAFPASGYHTPTIGWMADLDRMKVEELRHWYQSWYV 209

Query: 234 PDNAVLLIAGKFDAAQVLQWVDQSFGRLPKPKRTLPAFWTVEPTQDGERQFVIRRRGDQQ 293
           P+NA L++ G     +V     + FG +PK +   PA   +E  + GER   ++ +    
Sbjct: 210 PNNATLVVVGDVTPDEVKNLAQRYFGPIPK-RDVPPAKIPMELAEPGERLLTMKVQTQLP 268

Query: 294 LVALAYKMPSALHPD----ATALGFAADILTDTPNGRLHKALVETGMATEVYAMPLEGMA 349
            V L + +P     +      AL   + +L    + R+ + L          +   +   
Sbjct: 269 SVILGFNVPGLATAEDKRSVQALRLISALLDGGYSARISEQLERGEELVSAASTNYDAYT 328

Query: 350 PG--LQMMVA-----KVKVGGDLDAVRQAMISAVESFSTQPPTPEEVARLHREAANSFET 402
            G  L M+ A     K K     +A    +   +E    +PPT EE+ R+  +       
Sbjct: 329 RGDTLFMLTATPNQQKKKTVAQAEA---GLWRLLEELKAKPPTAEELERIRAQVIAGLVY 385

Query: 403 LQNNPQQLAVAMSNAIARG-DWRLLFIERDRMQRLSSADIAAAAGRYFRRDNRTVGLYLP 461
            +++    A A+ +    G  W+L+  E   +Q ++  DI  AA  YF R+  +V   LP
Sbjct: 386 QRDSITSQATAIGSLETVGLSWKLMDTELADLQSVTPEDIQKAARTYFIRERLSVAHVLP 445