Pairwise Alignments

Query, 333 a.a., ABC transporter substrate-binding protein from Herbaspirillum seropedicae SmR1

Subject, 321 a.a., ABC transporter, substrate binding protein (aliphatic sulfonate) from Agrobacterium fabrum C58

 Score = 68.6 bits (166), Expect = 2e-16
 Identities = 57/207 (27%), Positives = 102/207 (49%), Gaps = 8/207 (3%)

Query: 24  ALEKFKIGYLR--VMDDAQAMAAYEAGLYKKYGLDVELIEFKSGTDLVKAIVGGQLDSGV 81
           A    +IG+ +  V+  A++  A EA L K  G++V+  EF SG  L++A+  G LD G 
Sbjct: 29  ATTTLRIGWQKNGVIALAKSQGALEA-LLKDRGIEVKWSEFSSGPPLLEALGAGALDIGP 87

Query: 82  FGFSNAVAWASKGADLKVVGG--AQLGYHALVAREDSGINKVADLKGKTLASQAEGSTAD 139
            G    +   + G +L+ VG   A  G  A++ ++DS +  + DLKGK +A +   S  +
Sbjct: 88  TGDVPPLFAQAAGGNLRYVGTYKAAAGGSAILVQKDSPLKTLEDLKGKKVAFKRGSSAHN 147

Query: 140 TVLKGVVLRDAGIKADDVNVMGVSPQVAVQSLVGKRVDAAFLFEPQARIAQLIAPVKQVY 199
             +K   LR AG+   D+  + ++P  A  +     +DA  +++P   +A+   P  +V 
Sbjct: 148 VTVK--ALRKAGLTLSDITPVDLAPPDAAAAFRSGSIDAWSIWDPYFAVAEK-EPTTRVL 204

Query: 200 EIGEVWPFPCMVVITSGETLKKKREAV 226
              E    P    + +G+ ++   + V
Sbjct: 205 STAEGIVDPWSYFLANGDFVEANPDLV 231