Pairwise Alignments

Query, 301 a.a., LysR family transcriptional regulator from Herbaspirillum seropedicae SmR1

Subject, 293 a.a., predicted DNA-binding transcriptional regulator (NCBI) from Escherichia coli BW25113

 Score = 83.6 bits (205), Expect = 5e-21
 Identities = 66/246 (26%), Positives = 111/246 (45%), Gaps = 5/246 (2%)

Query: 1   MNLRFVEAFHWAASLKSITRAAEKLHITQSTMSSRIASLEEELGVVLLDRREKQFRLTVA 60
           M+L  +E F+  A   SIT+AA K+H   S +++R+  LE ELGV L  R  ++ RL+ A
Sbjct: 1   MDLTQLEMFNAVAEAGSITQAAAKVHRVPSNLTTRLRQLETELGVDLFIRENQRLRLSPA 60

Query: 61  GQRFQRLAVKLLDMQRQIRQELGGHSAGPLALRIGSIESVVHSWLPAWLQEIRCRYPDFA 120
           G  F R + ++L +  + R  + G     L   +GS+ES     +PA L E   RYP   
Sbjct: 61  GHNFLRYSQQILALVDEARSVVAGDEPQGL-FSLGSLESTAAVRIPATLAEFNRRYPKIQ 119

Query: 121 LELTVETSPVLTEQIRRGAQDLVFTSTVGSDTAVRSRLMTPMEMVFVGHRERFGTRSHT- 179
             L+   S  + + +  G  +  F     + TA+    +   E++ V  +   G    T 
Sbjct: 120 FSLSTGPSGTMLDGVLEGKLNAAFIDGPINHTAIDGIPVYREELMIVTPQ---GYAPVTR 176

Query: 180 LEELAAHDLITFQRGSQPHQGLLQLCQEWGVANPRIHAISSISAMVQLVEGGFGVATLPR 239
             ++   ++  F+      +         G A   IH + S   M+  V  G G+A +PR
Sbjct: 177 ASQVNGSNIYAFRANCSYRRHFESWFHADGAAPGTIHEMESYHGMLACVIAGAGIALIPR 236

Query: 240 ASVRQL 245
           + +  +
Sbjct: 237 SMLESM 242