Pairwise Alignments

Query, 291 a.a., ABC transporter permease from Herbaspirillum seropedicae SmR1

Subject, 303 a.a., ABC transporter permease subunit from Rhizobium sp. OAE497

 Score =  146 bits (369), Expect = 5e-40
 Identities = 90/286 (31%), Positives = 156/286 (54%), Gaps = 8/286 (2%)

Query: 9   LPWLLLSPAMVLLIAFTHYPALATLWHSFFSTPKGVRPSVFVGLENYRLMADDPVFWQAL 68
           LP+LL+ P ++++  F ++P    L+ SF   P     +V+VGL N   +A  PV+  A+
Sbjct: 12  LPYLLIGPQLLIIFLFFYWPTGQALFWSFTLEPPFGGDAVWVGLRNIAEIAVSPVYHSAI 71

Query: 69  CNNLWFALGTIPLAIALAILMALWVNEKLAGRGVLRLAYFTPTVLPMIAVANIWLFFYTP 128
            N L  ++ T  +A+ L ++ A++ +  L G  + + A   P  +     A  W + + P
Sbjct: 72  RNTLIMSVSTTVIALGLGLIFAVFADRGLRGTIIYKTAIMWPYAVAAPVAAVAWQYIFQP 131

Query: 129 Q---YGLLEQITGALGLPSHNWLGNPQTVLGALMVVAVWKEAGFFMIFYLAALQQISPVL 185
           Q    G++ Q       PS N  G    ++  ++V + W    F  +F+LA LQ I   L
Sbjct: 132 QIGFMGIVNQWYPGFWNPSLN--GGDALIM--VIVASSWTSITFNFVFFLAGLQAIPNSL 187

Query: 186 AEAAALEGASRWQYFWRVQFPLLMPTTLFVLINALINAFRLVDHIV-VMTKGGPDNASSL 244
            EAAA++GA   + F+ + FPL+ PT   +L+  +  +F     I+ VMT+GGP NA+  
Sbjct: 188 VEAAAMDGAGPVRRFFDLVFPLISPTFFLLLVLNVTTSFTEGFGIINVMTQGGPGNATQT 247

Query: 245 LLYYIYEVGFAFWDSSYAAALTVVLLALLGLIALVKFRVLDRRTHY 290
           ++Y IY+ GF   D S ++A +++L+AL+  + L++FR ++R+ HY
Sbjct: 248 MVYKIYKDGFVGLDLSSSSAQSLILMALVISVTLLQFRFVERKVHY 293