Pairwise Alignments

Query, 326 a.a., transcriptional regulator from Herbaspirillum seropedicae SmR1

Subject, 326 a.a., DNA-binding protein from Pseudomonas simiae WCS417

 Score =  107 bits (267), Expect = 4e-28
 Identities = 89/304 (29%), Positives = 132/304 (43%), Gaps = 6/304 (1%)

Query: 16  VARLYYFQNMTTAAIADEIGTSRATVSRLLSFALERGLVEIRVHDPQQVSGSLEAAIANH 75
           VA LYY +N+T  AIA     SRA VSRLL  A + G+VE+RV     ++  LE A+   
Sbjct: 18  VAMLYYLENVTQEAIAKRFDLSRAKVSRLLKRARDEGIVEVRVLQHPAMNNELERALVER 77

Query: 76  YRLHSIQVVPVAAAATDKETLQRVTCHAAAYVNSLVTPGTIIGLAWGTTVAQIADQL-LP 134
           ++L    ++ V  +  D +    V    A Y+N  ++ G I+ +  G  V  +AD + LP
Sbjct: 78  FKLDR-ALIAVDHSEPDTQR-SAVASLVANYLNKTLSDGMIVAVGMGRNVGAVADNVFLP 135

Query: 135 RHVHDVDVVALNGSGSGASFINSFSESIVSRFAQNYGARAHHLPVPAFFDYPETRTALWR 194
              +   V A+ GS     ++N   + I  R A  +G  +  L  PA    PE R  L  
Sbjct: 136 VTRNCTFVCAIGGSLKAGEYMN--PDHICRRLALRFGGESESLYAPALVANPELRGVLIN 193

Query: 195 EKSIKAIRDLQERASILLFSIGAEATGSYIHTAGYLGEEERQILRDEGLVGDIATV-FFR 253
             ++++  D   RA I L  IG  +  S +   G+   +E    R  G VGD+    F  
Sbjct: 194 NDTVRSTLDRARRADIALIGIGDMSENSNMVRMGWFSPQEIAQARLSGTVGDMMGYDFID 253

Query: 254 ADGSWRDVAFNARNSGPDMDCFTRAAHALCVVSGAGKLPGLKAALRGGFINELIIDEPSA 313
             G     A   R  G  +    R    + + S   K      ALR G IN L     +A
Sbjct: 254 IHGQPAVNAIQGRVIGLTVPELFRIPDVVAIASENTKAAATLGALRSGVINTLATTVTNA 313

Query: 314 RLLV 317
             ++
Sbjct: 314 HTIL 317