Pairwise Alignments

Query, 266 a.a., competence protein ComL from Herbaspirillum seropedicae SmR1

Subject, 339 a.a., Outer membrane protein assembly factor BamD from Pseudomonas putida KT2440

 Score =  200 bits (508), Expect = 4e-56
 Identities = 101/247 (40%), Positives = 149/247 (60%), Gaps = 5/247 (2%)

Query: 3   KILLKFFIIGFALSLTACGLLPEQKDETTGWSAAKLYSEAKDELNAGGYDKAIKYFEKLE 62
           K LL   I+G      AC    E  DE    S A+LY +A+ +L+   Y  A+   + LE
Sbjct: 4   KHLLLIAILGLT---AACSSNKEVIDENL--SEAELYQQAQADLDNSSYTSAVNKLKALE 58

Query: 63  SRYPFGTYAQQAQMDIAYAYYRQNEQAQGLAAVDRFIKLHPNHPNVDYMYYLRGLINFND 122
           SRYPFG YA QAQ+++ YA Y+ +E     +A +RFI+LHP HPNVDY YYL+GL +F+ 
Sbjct: 59  SRYPFGRYADQAQLELIYANYKNSEPEAAKSAAERFIRLHPQHPNVDYAYYLKGLTSFDQ 118

Query: 123 RTSIFDTFTDQDNTERDPKAMRDAFDSFKLLAERFPDSKYTPDAIARMKYLVNAMSQYDV 182
              +   F   D T+RDP A RD+++ F  L  RFP+S+Y PDA  RM YL N ++ Y++
Sbjct: 119 DRGLLARFLPLDMTKRDPGAARDSYNEFAQLTSRFPNSRYAPDAKQRMIYLRNLLASYEI 178

Query: 183 HVASYYFRRGAYVSAANRAQSAIKQYPDSPANEEALFILMRSYEALGQTKLKEDTERIIQ 242
           HVA YY  R AYV+AANR +  ++ + ++P+  + L +++ SY+ L   +L   +   ++
Sbjct: 179 HVADYYLSRQAYVAAANRGRYVVENFQETPSVGDGLAVMVESYQKLHLDELAATSLETLK 238

Query: 243 ATYPNSP 249
             YP+ P
Sbjct: 239 LNYPDHP 245