Pairwise Alignments

Query, 719 a.a., chemotaxis protein from Herbaspirillum seropedicae SmR1

Subject, 654 a.a., fused chemotactic sensory histidine kinase in two-component regulatory system with CheB and CheY: sensory histidine kinase/signal sensing protein from Escherichia coli BL21

 Score =  527 bits (1357), Expect = e-154
 Identities = 270/388 (69%), Positives = 323/388 (83%)

Query: 324 HESSSIRVSVEKVDQLINLVGELVITQAMIEQRVGKLDPMTHEHLLNSVSQLSRNTRDLQ 383
           +ES+SIRV+VEKVDQLINLVGELVITQ+M+ QR  +LDP+ H  L+ S+ QL RN RDLQ
Sbjct: 259 NESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQ 318

Query: 384 ESVMSIRMMPMDYVFSRFPRMVRDLAHKLGKQVEFVTHGAATELDKGLIERIVDPLTHLV 443
           ESVMSIRMMPM+YVFSR+PR+VRDLA KLGKQVE    G++TELDK LIERI+DPLTHLV
Sbjct: 319 ESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLV 378

Query: 444 RNSIDHGIELPDARRASGKSEAGTLSLSAEHQGGNIIIEVTDDGGGLNREKILAKAKQQG 503
           RNS+DHGIELP+ R A+GK+  G L LSAEHQGGNI IEVTDDG GLNRE+ILAKA  QG
Sbjct: 379 RNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQG 438

Query: 504 MPVTDNLSDAEVWQLIFEPGFSTAEQVTDVSGRGVGMDVVKRNILAMGGAVDIRSSKGFG 563
           + V++N+SD EV  LIF PGFSTAEQVTDVSGRGVGMDVVKRNI  MGG V+I+S +G G
Sbjct: 439 LTVSENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQEMGGHVEIQSKQGTG 498

Query: 564 TTISISLPLTLAILDGMSIRIGEEVYILPLGYVVESLQPLAQDIKEISGQGQVLRVRGEY 623
           TTI I LPLTLAILDGMS+R+ +EV+ILPL  V+ESLQP   D+  ++G  +VL VRGEY
Sbjct: 499 TTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEY 558

Query: 624 LPLIPLYQIFNIEPSFTDPSQGLVVILESDGKKAALFVDDLIGQQQIVVKNLESNYRKVA 683
           LP++ L+++FN+  + T+ +QG+VVIL+S G++ AL VD LIGQ Q+VVKNLESNYRKV 
Sbjct: 559 LPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVP 618

Query: 684 GISGATILGDGGVALIVDVAALLRSSRQ 711
           GIS ATILGDG VALIVDV+AL   +R+
Sbjct: 619 GISAATILGDGSVALIVDVSALQAINRE 646



 Score =  129 bits (323), Expect = 6e-34
 Identities = 78/231 (33%), Positives = 125/231 (54%), Gaps = 6/231 (2%)

Query: 1   MSIDMSQFFQVFFDEAEEGLAEMEKLLLAVNVASPDPEDLNAVFRAAHSIKGGSSTFGLT 60
           MS+D+S F+Q FFDEA+E LA+ME+ LL +   +PD E LNA+FRAAHSIKGG+ TFG +
Sbjct: 1   MSMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFS 60

Query: 61  DIAEVTHVLESLLDRIRQGQMALTSEHVDAFLAAKDVLKSMLDGHKHGADVDQGA---VA 117
            + E TH++E+LLD  R+G+M L ++ ++ FL  KD+++  LD +K   + D  +   + 
Sbjct: 61  VLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYIC 120

Query: 118 DVRRLLEALSQGKSSAPAKAAAPAAGGVPVAPGGVCR--YRIEMPVIADKDAEALADELA 175
              R L   ++G++ +     +  A   P       +   RI +  +   + + L +EL 
Sbjct: 121 QALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELG 180

Query: 176 MLGKIEKTKSPEGQWVFILDTAEPLDDVVAICAFIVNVADLKISQAVESAP 226
            L  +            IL      DD+ A+  F++  AD    + VE +P
Sbjct: 181 HLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIE-ADQITFETVEVSP 230