Pairwise Alignments

Query, 420 a.a., 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase from Herbaspirillum seropedicae SmR1

Subject, 369 a.a., 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase from Pseudomonas simiae WCS417

 Score =  204 bits (519), Expect = 4e-57
 Identities = 146/397 (36%), Positives = 211/397 (53%), Gaps = 51/397 (12%)

Query: 10  PLVRRNSRRVVISHGGREIVVGGGAPVMVQSMTNTDTADAIGTAIQIKDLARAGSEVVRL 69
           P+ RR SR++ +      + VGG AP+ VQSMTN+DT D   T  QI  L  AG ++VR+
Sbjct: 6   PIKRRVSRKIWVG----SVPVGGDAPIAVQSMTNSDTNDVAATVAQINRLEAAGVDIVRV 61

Query: 70  TVNTPEAAAAVPAIREQLDRMGVDVPLVGDFHYNGHTLLTEYPECAQALSKYRINPGNVG 129
           +V   +AA A   I++      V VPLV D H++    L         L   RINPGN+G
Sbjct: 62  SVPDMDAAEAFGRIKQL-----VKVPLVADIHFDYKIALRVAELGVDCL---RINPGNIG 113

Query: 130 KGAKRDTQFAQMIEVACKYDKPVRIGVNWGSLDQALLARIMDENAGRAEPWSAQAVMYEA 189
               R+ +   +++ A     P+RIGVN GSL++ L  +         EP  A      A
Sbjct: 114 ----REDRVRAVVDAARDRGIPIRIGVNAGSLEKDLQKKY-------GEPTPA------A 156

Query: 190 LVTSAIENAQRAEELGMAGDKIILSCKVSGVQDLIAVYRELARRCDYPLHLGLTEAGMGS 249
           LV SA+ + +  E L     K+  S K S V   +  YR LA+    PLHLG+TEAG   
Sbjct: 157 LVESALRHVEHLERLNFQDFKV--SVKASDVFMAVEAYRLLAKEIVQPLHLGITEAGGLR 214

Query: 250 KGIVASTAALSVLLQEGIGDTIRISLTPEPGGDRTKEVVVGQEILQTMGLRKFTPMVIAC 309
            G V S   L +LL EGIGDTIRISL  +P     +EV VG +IL+++ LR      IAC
Sbjct: 215 SGTVKSAVGLGMLLAEGIGDTIRISLAADP----VEEVKVGYDILKSLRLRSRGINFIAC 270

Query: 310 PGCGRTTSTVFQDLADKIQTFLREQMPVWKGKYPGVEAMNVAVMGCIVNGPGESKHANIG 369
           P C R    V + + D ++  L + +            ++VAV+GC+VNGPGE+K A++G
Sbjct: 271 PSCSRQNFDVVKTMND-LELRLEDLL----------VPLDVAVIGCVVNGPGEAKEAHVG 319

Query: 370 ISLPGTGESPAAPVFIDGEKKMTLRGEHIAEEFQKVV 406
           +    TG +P   ++IDG+    L  +++ +E +K++
Sbjct: 320 L----TGGTPNL-IYIDGKPSQKLTNDNLVDELEKLI 351