Pairwise Alignments

Query, 420 a.a., 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase from Herbaspirillum seropedicae SmR1

Subject, 372 a.a., 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (EC 1.17.7.1) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  195 bits (496), Expect = 2e-54
 Identities = 136/396 (34%), Positives = 210/396 (53%), Gaps = 54/396 (13%)

Query: 10  PLVRRNSRRVVISHGGREIVVGGGAPVMVQSMTNTDTADAIGTAIQIKDLARAGSEVVRL 69
           P+ RR S R+ + +    + +G GAP+ VQSMTNT T D   T  QIK L R G+++VR+
Sbjct: 6   PIQRRKSTRIYVGN----VPIGDGAPIAVQSMTNTRTTDVEATVNQIKALERVGADIVRV 61

Query: 70  TVNTPEAAAAVPAIREQLDRMGVDVPLVGDFHYNGHTLL--TEYPECAQALSKYRINPGN 127
           +V T +AA A   I++Q     V+VPLV D H++    L   EY      +   RINPGN
Sbjct: 62  SVPTMDAAEAFKLIKQQ-----VNVPLVADIHFDYRIALKVAEY-----GVDCLRINPGN 111

Query: 128 VGKGAKRDTQFAQMIEVACKYDKPVRIGVNWGSLDQALLARIMDENAGRAEPWSAQAVMY 187
           +G     + +   +++ A   + P+RIGVN GSL++ L      E  G   P        
Sbjct: 112 IGN----EERIRMVVDCARDKNIPIRIGVNAGSLEKDL-----QEKYGEPTP-------- 154

Query: 188 EALVTSAIENAQRAEELGMAGDKIILSCKVSGVQDLIAVYRELARRCDYPLHLGLTEAGM 247
           +AL+ SA+ +    + L    D+  +S K S V   +  YR LA++ D PLHLG+TEAG 
Sbjct: 155 QALLESAMRHVDHLDRLNF--DQFKVSVKASDVFLAVESYRLLAKQIDQPLHLGITEAGG 212

Query: 248 GSKGIVASTAALSVLLQEGIGDTIRISLTPEPGGDRTKEVVVGQEILQTMGLRKFTPMVI 307
              G V S   L +LL EGIGDT+R+SL  +P     +E+ VG +IL+++ +R      I
Sbjct: 213 ARSGAVKSAIGLGLLLSEGIGDTLRVSLAADP----VEEIKVGFDILKSLRIRARGINFI 268

Query: 308 ACPGCGRTTSTVFQDLADKIQTFLREQMPVWKGKYPGVEAMNVAVMGCIVNGPGESKHAN 367
           ACP C R    V     + ++  L +           +  M+V+++GC+VNGPGE+  + 
Sbjct: 269 ACPTCSRQEFDVI-GTVNALEQRLEDI----------ITPMDVSIIGCVVNGPGEALVST 317

Query: 368 IGISLPGTGESPAAPVFIDGEKKMTLRGEHIAEEFQ 403
           +G+    TG +  + ++ DG +K  L  + +  + +
Sbjct: 318 LGV----TGGNKKSGLYEDGVRKDRLDNDDMIAQLE 349