Pairwise Alignments

Query, 420 a.a., 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase from Herbaspirillum seropedicae SmR1

Subject, 416 a.a., 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase from Agrobacterium fabrum C58

 Score =  538 bits (1385), Expect = e-157
 Identities = 270/414 (65%), Positives = 332/414 (80%), Gaps = 4/414 (0%)

Query: 3   SSPIASGPLVRRNSRRVVISHGGREIVVGGGAPVMVQSMTNTDTADAIGTAIQIKDLARA 62
           +SP    P  RR S  V +  GG  ++VGGGAPV+VQSMTNTDTAD   T  Q+  L +A
Sbjct: 2   NSPADYDPKPRRAS--VAVDVGG--VIVGGGAPVVVQSMTNTDTADIDATVRQVAALFQA 57

Query: 63  GSEVVRLTVNTPEAAAAVPAIREQLDRMGVDVPLVGDFHYNGHTLLTEYPECAQALSKYR 122
           GSE+VR+TV+  E+AAAVP IRE+L R+G+DVPL+GDFHY GH LL ++P CA+AL+KYR
Sbjct: 58  GSEMVRITVDRDESAAAVPKIRERLLRLGMDVPLIGDFHYIGHKLLADHPACAEALAKYR 117

Query: 123 INPGNVGKGAKRDTQFAQMIEVACKYDKPVRIGVNWGSLDQALLARIMDENAGRAEPWSA 182
           INPGNVG   K+D QF +++E+A +YDKPVRIGVNWGSLDQ LL  +MD N  +  P SA
Sbjct: 118 INPGNVGFKDKKDKQFGEIVEMAIRYDKPVRIGVNWGSLDQELLTTLMDRNKEQGFPLSA 177

Query: 183 QAVMYEALVTSAIENAQRAEELGMAGDKIILSCKVSGVQDLIAVYRELARRCDYPLHLGL 242
           + V  EA+V SA+ +A+ AEE+G+  ++IILS KVS VQDLIAVY  L+ R ++ LHLGL
Sbjct: 178 RQVTREAIVQSALISAELAEEIGLPRNRIILSAKVSQVQDLIAVYSMLSERSNHALHLGL 237

Query: 243 TEAGMGSKGIVASTAALSVLLQEGIGDTIRISLTPEPGGDRTKEVVVGQEILQTMGLRKF 302
           TEAGMGSKGIVAS+AA+  +LQ GIGDTIR+SLTPEP GDRT+EV V QE+LQ MG R+F
Sbjct: 238 TEAGMGSKGIVASSAAMGYVLQHGIGDTIRVSLTPEPNGDRTREVQVAQELLQVMGFRQF 297

Query: 303 TPMVIACPGCGRTTSTVFQDLADKIQTFLREQMPVWKGKYPGVEAMNVAVMGCIVNGPGE 362
            P+V ACPGCGRTTSTVFQ+LA  IQ  +R+ MP+W+ KYPGVEA+NVAVMGCIVNGPGE
Sbjct: 298 IPVVAACPGCGRTTSTVFQELAQNIQNDIRKNMPIWREKYPGVEALNVAVMGCIVNGPGE 357

Query: 363 SKHANIGISLPGTGESPAAPVFIDGEKKMTLRGEHIAEEFQKVVLDYVESHYGQ 416
           SKHA+IGISLPGTGESPAAPVFIDGEK +TLRG +IA +F+ +V+DY+E  +GQ
Sbjct: 358 SKHADIGISLPGTGESPAAPVFIDGEKALTLRGPNIAADFEALVIDYIEKRFGQ 411