Pairwise Alignments

Query, 780 a.a., TonB-dependent receptor from Herbaspirillum seropedicae SmR1

Subject, 819 a.a., TonB-dependent receptor from Agrobacterium fabrum C58

 Score =  218 bits (556), Expect = 8e-61
 Identities = 207/827 (25%), Positives = 346/827 (41%), Gaps = 86/827 (10%)

Query: 3   ALATMTSLSVPVTSAYAQSAAAQSYHLPSGPLDQTLLRIAQQSGLLISYEPALVKSLQSA 62
           A    ++L++  ++ +AQ +   SY +P+G L++ L+R    SG+ + Y  A+     +A
Sbjct: 26  ASIAFSALAMTSSTVFAQQSV--SYSIPAGSLERGLIRFGAASGIQVLYNSAVANGRDTA 83

Query: 63  PVEGNFTAPEAIKKALSNTGLELVATPSGKWTLRPVAGASTTSTTETPAHKAIADAELPL 122
            + G  +   A++  L+NTGL          T R     S T     PA  A+ D    +
Sbjct: 84  GISGPLSPEAALQGLLANTGL----------TYRFTGPKSVTVADPAPAPGAVTDESATI 133

Query: 123 ISV-----AATADSGGTGFVAESSATFSRTDTPLSETPKSVSVINAAVIQSQSAQTLSDV 177
           +       A +A     G VA  SAT ++TDTPL E P+S+SVI A  ++++ A+T+ + 
Sbjct: 134 LQTITVQGAESAYGHVDGIVASRSATGTKTDTPLIEVPQSISVITADEVKARGAETIKEA 193

Query: 178 LRNASGVVARPGPYGVPSF---AIRGYVGNAPVMSDG--LSSYGSAASPAALTPTIAIAG 232
           +   +GV          +F    IRG+    P+  DG  L   G       + P + +  
Sbjct: 194 VNYTAGVHVGGSSASTRAFDNIEIRGFAPT-PLYLDGTYLPYIGDLGGSPQIDPYL-LER 251

Query: 233 VEVVKGPSAIMAADAPPGGVVNVIKKAPQVEPFHEVQVAYGSNSFSQVAFDSTGAIDEDK 292
           +EV+KGPS+++     PGG++N++ K P  +PF+EV    G++  +  AFD +G +  + 
Sbjct: 252 IEVLKGPSSVLYGQNYPGGMINMVSKRPTDKPFNEVVAGTGTDGRAYGAFDFSGPVAGND 311

Query: 293 RLRYRFVVSADKSSENFMGYDGGRHFYIAPTLQWK-DRSTDLT----------------L 335
              YR    A ++  N + Y     F +AP+   K D  T  T                L
Sbjct: 312 AFLYRLTGVATRTGTN-IDYTKDERFMLAPSFALKPDEDTTFTFLSHYQKDNGVPDYQPL 370

Query: 336 GYAHTVTREPF-----------PQYTVGYARGGYVDGYVEHPLGNRGDHFSMTADELTAK 384
            Y  TV   P+           P Y  GY RG  V GY           F    D++ + 
Sbjct: 371 PYIGTVKAGPYGAINRDFFTGEPAYN-GYDRGQAVLGY----------EFKHQFDDVWS- 418

Query: 385 LEQKLSDNLTFVS-KNGYTSTTQGQDGWAAASTVTNSNALTLLGFKSSANYYTANSQNYL 443
               +  N  ++S  + Y +   G  G+     VT+   +       S+N     +   L
Sbjct: 419 ----IRHNAKYISVDDSYRTFFSG--GYVETGGVTDYTKMRRNAIDYSSNNQVFATDTNL 472

Query: 444 RLKSDLAGVKSTTLVGVDYSYMHYVQYDRNSSSTTTIPDIFGTINVAPISSPLTYQFGGQ 503
           + +     V  T +VG DY +       R     T + D+F     +     +  ++  +
Sbjct: 473 QAEFSTGEVGHTVIVGTDYKWFRNDYTGRYGFGNTPL-DVFNPRYGSYREPTVGARWDNR 531

Query: 504 TQRVGSYLQEQLIYSNLTVLASIRRDSYLSSTNIVGRAPSGGMHQTAYSPSLGLMYQLTP 563
             ++G Y Q+Q+ + N  +    R D  L + N +  +  G    TA++   GL+Y    
Sbjct: 532 ISQLGLYAQDQIKWDNWILTLGGRYDWALQTDNDILSSTIGKKTDTAFTGRAGLIYLFDN 591

Query: 564 EIAPYVNWNKGFQPNNVTAYGGGLLAPKQSEQFEAGVKFNLMDDKLELTTALYHIDYTNQ 623
             APYV+++  F P +          P   EQ+E G+K+  +     +T + + +   N 
Sbjct: 592 GFAPYVSYSTSFMPYSGFDGQNNPFKPTTGEQWEVGLKYEPVGYDALITVSAFDLKQKNV 651

Query: 624 SISDPVHRGFYISTGGAVSQGLEVELKGQIMPGLNVIAQYAYNNYV----QDYAPTVKVN 679
              D         TG    QG+E+E K  +   L++IA  +Y + V     D     KV 
Sbjct: 652 PTYDE-FTYLPAQTGEIHVQGIEIEGKATVFDSLDLIAAASYTDSVYSKADDGTQGNKVR 710

Query: 680 -LPHHTGSIWTTYNFRSPALQGFGVGMGVFMSSGQDVGSTGNYHVPGQTETDLGLFY--- 735
            +P    S+W  Y      L+G G G GV  SS     +  ++  P  T  D  L Y   
Sbjct: 711 FMPPVNVSLWGKYRIEDGPLEGLGFGAGVRHSSSGYGDAANSFKYPAYTVVDAALSYDFG 770

Query: 736 ----KMEKYSLNLSVKNLFNHKLYSSSTSASFIPMGPERTLMLTGTY 778
               K+E   LN++ +NLF+    S  ++ +    G  R +    +Y
Sbjct: 771 KQNPKLEGLELNVTAQNLFDKTYVSGCSNINSCFYGKSRAVYANLSY 817