Pairwise Alignments
Query, 510 a.a., calcium-binding protein from Herbaspirillum seropedicae SmR1
Subject, 1610 a.a., Hemolysin-type calcium-binding region:Putative Ig from Pseudomonas syringae pv. syringae B728a ΔmexB
Score = 103 bits (257), Expect = 5e-26
Identities = 72/209 (34%), Positives = 108/209 (51%), Gaps = 14/209 (6%)
Query: 36 PKKSKEVAAPKNLSLDEDTDDLSLG--SSLNGIGNALDNRLTGNDQNNILDGMGGTDTMI 93
P + V + + +L + ++L L S++NGIGNA+ N + GN NNILDG G D +
Sbjct: 1280 PSQVDTVVSSVSWTLGANVENLVLTGVSAINGIGNAVKNVIIGNASNNILDGAAGADMLT 1339
Query: 94 GGKGDDSYYLDNAGDKIVE-----QAGEGVDTVYAT-ASTTLAANVENLVLLDASKPQSA 147
GG G DSYY+D+A D++VE Q G GVDTVY++ AS TL AN+ENLV +++S +A
Sbjct: 1340 GGDGSDSYYVDDAADRVVETNTDAQVG-GVDTVYSSLASYTLGANLENLV-INSSGAANA 1397
Query: 148 VVNGVNVLVYGMPRSYQLDYDQGGEVEGY-WGTCGETSVANVTLM---GGHAVSEKEVVQ 203
N ++ L+Y +D G + Y + T G T N + GG + + +
Sbjct: 1398 TGNALDNLIYAGAGDNVMDGRDGNDTVSYLFATAGVTVALNTSAQQATGGSGLDTLKGTE 1457
Query: 204 RAIKENLCDTAAESADTRGATSEDDRQAL 232
I DT + + + D L
Sbjct: 1458 NLIGSQFADTLTGNKNANTLSGGDGNDTL 1486
Score = 89.7 bits (221), Expect = 7e-22
Identities = 93/347 (26%), Positives = 137/347 (39%), Gaps = 58/347 (16%)
Query: 67 GNALDNRLTGNDQNNILDGMGGTDTMIGGKGDDSYYLDNAGDKIVEQ--AGEGVDTVYAT 124
G + D+ L G+ N++LDG G D M GG G+D Y +DNA D + E + VDTV ++
Sbjct: 1230 GTSDDDTLVGSSGNDVLDGDQGADDMSGGDGNDIYVVDNAFDTVTESNDSPSQVDTVVSS 1289
Query: 125 ASTTLAANVENLVLLDASKPQSAVVNGVNVLVYGMPRSYQLDYDQGGEVEGYWGTCGETS 184
S TL ANVENLVL S + + N V ++ G + LD G ++
Sbjct: 1290 VSWTLGANVENLVLTGVSAI-NGIGNAVKNVIIGNASNNILDGAAGADM----------- 1337
Query: 185 VANVTLMGGHAVSEKEVVQRAIKENLCDTAAESADTRGATSEDDRQALLQDFGFAASVEE 244
L GG V ++ D E+ D + L + A++E
Sbjct: 1338 -----LTGGDGSDSYYV------DDAADRVVETNTDAQVGGVDTVYSSLASYTLGANLEN 1386
Query: 245 -ELDLKAVAQSIKDGKGVIISVSASKLWDLHEENEDASDHAITVTGVACSAASGKIVGFY 303
++ A + + +I A + D + GV + +
Sbjct: 1387 LVINSSGAANATGNALDNLIYAGAGDNVMDGRDGNDTVSYLFATAGVTVALNTSA----Q 1442
Query: 304 IADSGRGLASDMCRFVSLQRLRAATNVYGADTVTTDDPIKLRNQNLDATGNELDNILVGN 363
A G GL + L+ N+ G+ T TGN+ N L G
Sbjct: 1443 QATGGSGLDT----------LKGTENLIGSQFADT------------LTGNKNANTLSGG 1480
Query: 364 RGNNALTGGKGNDLLIGGAGNDTYAFAKGDGQDVLYDHDATKGNLDT 410
GN+ L+GG G+D+LIGG+G DT G DH G DT
Sbjct: 1481 DGNDTLSGGAGDDVLIGGSGADTLIGGTG------ADHYVFNGISDT 1521
Score = 50.4 bits (119), Expect = 5e-10
Identities = 45/161 (27%), Positives = 66/161 (40%), Gaps = 27/161 (16%)
Query: 349 LDATGNELDNILVGNRGNNALTGGKGNDLLIGGAGNDTYAFAKGDGQDVLYDHDATKGNL 408
++ GN + N+++GN NN L G G D+L GG G+D+Y + V + DA G +
Sbjct: 1309 INGIGNAVKNVIIGNASNNILDGAAGADMLTGGDGSDSYYVDDAADRVVETNTDAQVGGV 1368
Query: 409 DTLSFSDVKQT------NLWLSKAGNDLRIDVLGTTDQVLVKDWYVG-GDSGSDNHVERI 461
DT+ S T NL ++ +G T L Y G GD+ D
Sbjct: 1369 DTVYSSLASYTLGANLENLVINSSG------AANATGNALDNLIYAGAGDNVMDGR---- 1418
Query: 462 KTADGKTLYDSDVDKLVQAMASFAPPAATQTSWPETAGGNG 502
DG D + A+ A TS + GG+G
Sbjct: 1419 ---DGN-------DTVSYLFATAGVTVALNTSAQQATGGSG 1449
Score = 43.9 bits (102), Expect = 4e-08
Identities = 82/360 (22%), Positives = 128/360 (35%), Gaps = 60/360 (16%)
Query: 67 GNALDNRLTGNDQNNILDGMGGTDTMIGGKGDDSYYLDNAGDKIVEQAGEGVDTVYATAS 126
G A + LTG D N++L+G GTD + GG G D+ + D G G D +
Sbjct: 536 GTAGGDTLTGTDGNDVLNGNAGTDRIDGGAGADT--ITGGADADTLTGGAGADLFIYNSR 593
Query: 127 TTLAANVENLVLLDASKPQSAVVNGVNVLVYGMPRSYQLDYDQGGEVEGYWGTCGETSVA 186
N + QS + N P ++D G + G T
Sbjct: 594 LDSYRNYTA-----SGTKQSDTITDFN------PAEDRIDLSSIG-LRGIGDGSANTIYL 641
Query: 187 NVTLMGGHAVSEKEVVQR-------AIKENLCDTAAESADTRGATSEDDRQALLQDFGFA 239
+V G + + V A++ NL D + S S ++ +L
Sbjct: 642 SVNADGSKTYIKTDAVDSTGNRFEIALQGNLADKLSASNFIFSTASAANQAPVLNTPLMD 701
Query: 240 ASVEEELDLKAVAQSIKDGKGVIISVSASKLWDLHEENEDASDHAITVTGVACSAASGKI 299
+V E LKA + +++ G + + D ++ T+ + K
Sbjct: 702 QNVTE---LKAFSYAVQPGS-------------FSDPDSDTLTYSATLADNSALPEWLKF 745
Query: 300 VGFYIADSGR--GLASDMCRFVSLQRLRAATNVYGADTVTTDDPIKLRNQNLDATGNELD 357
+ SG G AS + + L AT AD+ + GN
Sbjct: 746 DSKTLTFSGTPGGTASGL--YSVLLTASDATGASVADSFAIN------------VGNVTP 791
Query: 358 NILVGNRGNNALTGGKGNDLLIGGAGNDTYAFAKGD-GQDVL---YDHDATKGNLDTLSF 413
IL G AL G +GND ++G G+DT +GD G D++ DA G D +F
Sbjct: 792 GILTGTENAEALYGTEGNDTILGLGGDDT---LRGDTGADIINGGAGRDALYGGADADTF 848
Score = 43.5 bits (101), Expect = 6e-08
Identities = 70/300 (23%), Positives = 118/300 (39%), Gaps = 71/300 (23%)
Query: 216 ESADTRGATSEDDRQALLQDFGFAASVEEELDL-KAVAQSIKDGKGVIISVSASKL---- 270
++A RG T E A+++ G+ SV+E + +A + D + + + L
Sbjct: 1119 DAAKARGYTDEKIN-AIVEGAGYVRSVQEAIATERADVKLAVDYTDLPLRYEVNPLVYPD 1177
Query: 271 --WDLHEENEDASDHAITVTGVACSAASGKIVGFYIADSGRGLASDMCRFVSLQRLRAAT 328
W LHEE S +IVG +AD +A D+
Sbjct: 1178 DVWHLHEE-------------------SAEIVGQRLADF---IADDLG------------ 1203
Query: 329 NVYGADTVTTDDPIKL----RNQNLDATGNELDNILVGNRGNNALTGGKGNDLLIGGAGN 384
+ + +DP + +N+ G D+ LVG+ GN+ L G +G D + GG GN
Sbjct: 1204 --FQGNAADNNDPAAIFESGQNEGGHIFGTSDDDTLVGSSGNDVLDGDQGADDMSGGDGN 1261
Query: 385 DTYAFAKGDGQDVLYDHDATKGNLDTLSFSDVKQT------NLWLSKA------GNDLRI 432
D Y + D + + + + +DT+ S V T NL L+ GN ++
Sbjct: 1262 DIYVV--DNAFDTVTESNDSPSQVDTV-VSSVSWTLGANVENLVLTGVSAINGIGNAVKN 1318
Query: 433 DVLGTT-----DQVLVKDWYVGGDSGSDNHVERIKTADGKTLYDSD---VDKLVQAMASF 484
++G D D GGD +V+ +T D+ VD + ++AS+
Sbjct: 1319 VIIGNASNNILDGAAGADMLTGGDGSDSYYVDDAADRVVETNTDAQVGGVDTVYSSLASY 1378
Score = 42.4 bits (98), Expect = 1e-07
Identities = 95/423 (22%), Positives = 161/423 (38%), Gaps = 49/423 (11%)
Query: 46 KNLSLDEDTDDLSLGSSLNGIGNALDNRLTGNDQNNILDGMGGTDTMIGGKGDDSYYLDN 105
KNL+LD + D + ++G N G D N LD + D G G D + +
Sbjct: 103 KNLTLDGNRDATT--GKVDGWFNGYIPGSDGKDSNVTLDSVEIKDC--SGYGFDPH--EQ 156
Query: 106 AGDKIVEQA---GEGVDTVYATASTTLAANVENLVLLDASKPQSAVVNGVNVLV--YGMP 160
+ +++ + G G+D A + EN V D + +G NV+ +
Sbjct: 157 TVNMVIKNSVSHGNGLDGFVADYLSDSV--FENNVAYDNDR------HGFNVVTSTHDFT 208
Query: 161 RSYQLDYDQGGE-VEGYWGTCGETSVANVTLMGGHA---VSEKEVVQRAIKENLC----- 211
S + Y G + G+ S AN+T+ GG +E +++ + + ++
Sbjct: 209 LSNNVAYGNGSTGIVVQRGSENIPSPANITITGGAVYGNAAEGVLIKLSSQVSVSGVDIH 268
Query: 212 DTAAESADTRGATSEDDRQALLQDFGFAASVEEEL-----DLKAVAQSIKDG-----KGV 261
D G++ D L + ++V E + D V+ G +G
Sbjct: 269 DNGNAGVRIYGSSGVDIFDNTLSNNALGSAVPEIIIQSYDDTTGVSGKFFSGSDNLIRGN 328
Query: 262 IISVSASKLWDLHEENEDASDHAITVTGVACSAASGKIVGFYIADSGRGLASDMCRFVSL 321
I+ S + + + E NED +D ++ G S S G + A D V++
Sbjct: 329 TITGSDNSTYGVAERNEDGTDRN-SIVGNTISHTSK---GLTLVYGDGSFAGDAFPLVTV 384
Query: 322 QRLRAATNVYGADTVTTDDPIKLRNQNLDATGNELDNILVGNRGNNALTGGKGNDLLIGG 381
+ G + L ++ G D+ILVG G + LTGG G D
Sbjct: 385 NGTEGNDVITGG--AAHEQIFGLAGKDT-LNGGSGDDILVGGAGADKLTGGAGADTFRFD 441
Query: 382 AGNDTYAFAKGDGQDVLYDHDATKGNLDTLSFSDVKQTNLWLSKAGNDLRIDVLGTTDQV 441
D+Y A D++ D D ++ D + +++ T L K G L I T D+
Sbjct: 442 QLTDSYRTATTSSTDLVTDFDISQ---DRIDLTNLGFTGLGSGKGGT-LNISYNATLDRT 497
Query: 442 LVK 444
VK
Sbjct: 498 YVK 500
Score = 40.0 bits (92), Expect = 6e-07
Identities = 23/62 (37%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Query: 58 SLGSSLNGIGNALDNRLTGNDQNNILDGMGGTDTMIGGKGDDSYYLDNAGDKIVEQAGEG 117
+L + N IG+ + LTGN N L G G DT+ GG GDD + D ++ G G
Sbjct: 1452 TLKGTENLIGSQFADTLTGNKNANTLSGGDGNDTLSGGAGDDVLIGGSGADTLI--GGTG 1509
Query: 118 VD 119
D
Sbjct: 1510 AD 1511
Score = 37.0 bits (84), Expect = 5e-06
Identities = 22/60 (36%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
Query: 66 IGNALDNRLTGNDQNNILDGMGGTDTMIGGKGDDSYYLDNAGDKIVEQAGEGVDTVYATA 125
+GN LTG + L G G DT++G GDD+ D D I G G D +Y A
Sbjct: 786 VGNVTPGILTGTENAEALYGTEGNDTILGLGGDDTLRGDTGADII--NGGAGRDALYGGA 843
Score = 36.6 bits (83), Expect = 7e-06
Identities = 34/119 (28%), Positives = 51/119 (42%), Gaps = 11/119 (9%)
Query: 352 TGNELDNILVGNRGNNALTGGKGNDLLIGGAGNDTYAFAKGDGQDVLYDHDATKGNLDTL 411
TG + +++L GN G + + GG G D + GGA DT G G D L+ +++ +
Sbjct: 544 TGTDGNDVLNGNAGTDRIDGGAGADTITGGADADT--LTGGAGAD-LFIYNSRLDSYRNY 600
Query: 412 SFSDVKQTNLWLSKAGNDLRIDVLGTTDQVLVKDWYVGGDSGSDNHVERIKTADGKTLY 470
+ S KQ++ + RID L G GS N + ADG Y
Sbjct: 601 TASGTKQSDTITDFNPAEDRID--------LSSIGLRGIGDGSANTIYLSVNADGSKTY 651
Score = 32.3 bits (72), Expect = 1e-04
Identities = 26/91 (28%), Positives = 41/91 (45%), Gaps = 9/91 (9%)
Query: 300 VGFYIADSGRGLASDMCRFVSLQRLRAATNVYGADTVTTDDPIKLR-----NQNLDATGN 354
+GF SG+G ++ +L R T V D + + +L L+A+
Sbjct: 473 LGFTGLGSGKGGTLNISYNATLDR----TYVKSLDADASGNRFELGLSGNLKDTLNASHF 528
Query: 355 ELDNILVGNRGNNALTGGKGNDLLIGGAGND 385
+++ G G + LTG GND+L G AG D
Sbjct: 529 IFQHVVEGTAGGDTLTGTDGNDVLNGNAGTD 559