Pairwise Alignments

Query, 802 a.a., peptidase from Herbaspirillum seropedicae SmR1

Subject, 784 a.a., DNA-binding ATP-dependent protease La (NCBI) from Escherichia coli BW25113

 Score = 1066 bits (2756), Expect = 0.0
 Identities = 541/773 (69%), Positives = 644/773 (83%), Gaps = 1/773 (0%)

Query: 4   PILTEQSQLPLLPLRDVVVFPHMVIPLFVGRPKSIKALEAAMEQGKSIMLAAQKAAAKDE 63
           P  +E+ ++P+LPLRDVVV+PHMVIPLFVGR KSI+ LEAAM+  K IML AQK A+ DE
Sbjct: 3   PERSERIEIPVLPLRDVVVYPHMVIPLFVGREKSIRCLEAAMDHDKKIMLVAQKEASTDE 62

Query: 64  PSAEDIYEIGCVANILQMLKLPDGTVKVLVEGAQRARIHHISELDTHFVADLTPVESEQG 123
           P   D++ +G VA+ILQMLKLPDGTVKVLVEG QRARI  +S+   HF A    +ES   
Sbjct: 63  PGVNDLFTVGTVASILQMLKLPDGTVKVLVEGLQRARISALSDNGEHFSAKAEYLESPTI 122

Query: 124 DDAEVEAMRRTIVQQFDQYVKLNKKIPPEILTSLAGIDDAGRLADTIAAHLPLKLEQKQV 183
           D+ E E + RT + QF+ Y+KLNKKIPPE+LTSL  IDD  RLADTIAAH+PLKL  KQ 
Sbjct: 123 DEREQEVLVRTAISQFEGYIKLNKKIPPEVLTSLNSIDDPARLADTIAAHMPLKLADKQS 182

Query: 184 ILEIFNVAKRYEHLLGQLEGELDILQVEKRIRGRVKRQMEKSQREYYLNEQVKAIQKELG 243
           +LE+ +V +R E+L+  +E E+D+LQVEKRIR RVK+QMEKSQREYYLNEQ+KAIQKELG
Sbjct: 183 VLEMSDVNERLEYLMAMMESEIDLLQVEKRIRNRVKKQMEKSQREYYLNEQMKAIQKELG 242

Query: 244 EGEDGADLEE-LEKKIAAAKMPKEALEKAQSELKKLKLMSPMSAEATVVRNYIDTLVALP 302
           E +D  D  E L++KI AAKMPKEA EKA++EL+KLK+MSPMSAEATVVR YID +V +P
Sbjct: 243 EMDDAPDENEALKRKIDAAKMPKEAKEKAEAELQKLKMMSPMSAEATVVRGYIDWMVQVP 302

Query: 303 WKKKSKVNNDLTNAEKVLEGDHYGLEKVKERILEYLAVQQRVDKLKAPILCFVGPPGVGK 362
           W  +SKV  DL  A+++L+ DHYGLE+VK+RILEYLAVQ RV+K+K PILC VGPPGVGK
Sbjct: 303 WNARSKVKKDLRQAQEILDTDHYGLERVKDRILEYLAVQSRVNKIKGPILCLVGPPGVGK 362

Query: 363 TSLGQSIARATNRKFVRMALGGVRDEAEIRGHRRTYIGSMPGKILQSLSKVGVRNPLFLL 422
           TSLGQSIA+AT RK+VRMALGGVRDEAEIRGHRRTYIGSMPGK++Q ++KVGV+NPLFLL
Sbjct: 363 TSLGQSIAKATGRKYVRMALGGVRDEAEIRGHRRTYIGSMPGKLIQKMAKVGVKNPLFLL 422

Query: 423 DEIDKLGMDFRGDPSSALLEVLDPEQNHTFSDHYIEVDFDLSDVMFVATSNSFNIPPALL 482
           DEIDK+  D RGDP+SALLEVLDPEQN  FSDHY+EVD+DLSDVMFVATSNS NIP  LL
Sbjct: 423 DEIDKMSSDMRGDPASALLEVLDPEQNVAFSDHYLEVDYDLSDVMFVATSNSMNIPAPLL 482

Query: 483 DRMEVIRLSGYTEDEKTSIAQRYLLPKQIKNNGLKEGEISVAESAIRDIIRYYTREAGVR 542
           DRMEVIRLSGYTEDEK +IA+R+LLPKQI+ N LK+GE++V +SAI  IIRYYTREAGVR
Sbjct: 483 DRMEVIRLSGYTEDEKLNIAKRHLLPKQIERNALKKGELTVDDSAIIGIIRYYTREAGVR 542

Query: 543 SLEREVSKICRKVVKLLLLKKQEKKVTVTSRNLDKFLGVRRFDFGIAEKENQIGQVVGLA 602
            LERE+SK+CRK VK LLL K  K + +   NL  +LGV+RFD+G A+ EN++GQV GLA
Sbjct: 543 GLEREISKLCRKAVKQLLLDKSLKHIEINGDNLHDYLGVQRFDYGRADNENRVGQVTGLA 602

Query: 603 WTEVGGDLLTIEAVNMPGKGQIIRTGTLGDVMKESIEAARTVVRSRARKLGIKNEVFEKS 662
           WTEVGGDLLTIE   +PGKG++  TG+LG+VM+ESI+AA TVVR+RA KLGI  + +EK 
Sbjct: 603 WTEVGGDLLTIETACVPGKGKLTYTGSLGEVMQESIQAALTVVRARAEKLGINPDFYEKR 662

Query: 663 DIHIHVPEGATPKDGPSAGIAMTTALVSIFSGIPVRADVAMTGEITLRGEVLPIGGLKEK 722
           DIH+HVPEGATPKDGPSAGIAM TALVS  +G PVRADVAMTGEITLRG+VLPIGGLKEK
Sbjct: 663 DIHVHVPEGATPKDGPSAGIAMCTALVSCLTGNPVRADVAMTGEITLRGQVLPIGGLKEK 722

Query: 723 LLAAHRGGIKTVLIPEQNVKDLAEIPDNVKNKLEIIPVRWIDKVLEVALERQP 775
           LLAAHRGGIKTVLIP +N +DL EIPDNV   L+I PV+ I++VL +AL+ +P
Sbjct: 723 LLAAHRGGIKTVLIPFENKRDLEEIPDNVIADLDIHPVKRIEEVLTLALQNEP 775