Pairwise Alignments

Query, 156 a.a., spore coat protein from Herbaspirillum seropedicae SmR1

Subject, 316 a.a., hypothetical protein from Agrobacterium fabrum C58

 Score = 67.0 bits (162), Expect = 3e-16
 Identities = 42/139 (30%), Positives = 73/139 (52%), Gaps = 13/139 (9%)

Query: 19  AGAQQVCSASSSPVSFGLYDPQSSATIDNAGSISVTCQATVSLLMAYTVKLSSGNSGAL- 77
           A     C  S+  ++FG +   ++A +D  G+I++TC   ++    Y+V L+ G S +  
Sbjct: 190 AAVAPTCIISAQNINFGSHGVLNTA-VDANGAINLTCTNGLN----YSVALNGGLSNSPP 244

Query: 78  SQRKMLSGANSLNYQVYTDAARSSIWGDGSSGTSFITDGYLLQVLTPVVKHYTVYGRVPG 137
           + R+M+ GA S+ Y +Y D +R+++WG  +   +  T    LQ L       TV+GRVP 
Sbjct: 245 AARQMVQGAASIIYGLYRDVSRTNVWGSAAGQIATGTGNGSLQTL-------TVFGRVPA 297

Query: 138 SQNVKAGSYLDTLTILITY 156
                 G+Y DT+ + + Y
Sbjct: 298 QNTPAPGNYADTVVVTVNY 316



 Score = 66.6 bits (161), Expect = 3e-16
 Identities = 47/154 (30%), Positives = 77/154 (50%), Gaps = 10/154 (6%)

Query: 3   MARAAILALLLVAGTPAGAQQVCSASSSPVSFGLYDPQSSATIDNAGSISVTCQATVSLL 62
           + RAA+        +P  AQ  C+ S S ++FG  +    A +D   ++SVTC   +SL 
Sbjct: 4   LTRAALAIAAAFVASPVLAQS-CTFSMSDMNFGFVNLAGGAAVDTTATLSVTCNNPLSLA 62

Query: 63  MAYTV--KLSSGNSGALSQ-RKMLSGANSLNYQVYTDAARSSIWGDGSS---GTSFITDG 116
           ++  +   +++G  G     R+ML G+N LNYQ+Y  +AR++ WG  +    G     D 
Sbjct: 63  LSIRICPNINAGGGGQSGGIRRMLQGSNILNYQLYQTSARTTAWGSVTQPALGAPPPIDM 122

Query: 117 YLLQVLTPVVKHYTVYGRV-PGSQNVKAGSYLDT 149
            L  ++    +  TVYGR+  G  +   G YL +
Sbjct: 123 ALPLLINSTTR--TVYGRINAGQASAARGLYLSS 154