Pairwise Alignments

Query, 293 a.a., branched-chain amino acid ABC transporter ATP-binding protein from Herbaspirillum seropedicae SmR1

Subject, 255 a.a., branched chain amino acid transporter - ATP binding subunit from Pseudomonas putida KT2440

 Score =  202 bits (513), Expect = 8e-57
 Identities = 96/249 (38%), Positives = 153/249 (61%)

Query: 42  ILDLQNISLSFGGVKALTDISFDVREHEIRAIIGPNGAGKSSMINVINGVYHPQKGRILY 101
           IL +  +S+ FGG+ A+  ++  V+E ++ A+IGPNGAGK+++ N + G Y P  G IL 
Sbjct: 5   ILQVSGLSMRFGGLLAVNGVALTVKEKQVVALIGPNGAGKTTVFNCLTGFYKPSGGTILL 64

Query: 102 RGQPRAGMHPSAIARQGIARTFQNIALFKGMTVLDNIMTGRNTKMRSGLLSNAMWWGAAR 161
            GQP  G+    IAR+G+ RTFQN+ LFK MT L+N++  ++  + +   +      + R
Sbjct: 65  DGQPIQGLAGHQIARKGVVRTFQNVRLFKEMTALENLLIAQHRHLNTNFFAGLFKTPSFR 124

Query: 162 NEEIEHRRKVEQVIDFLEIQHIRKTPVGRLPYGLQKRVELARALAAEPHMLLLDEPMAGM 221
             E E   + +  ++ + +        G L YG Q+R+E+AR +  +P +++LDEP AG+
Sbjct: 125 RSEKEAMERAQYWLEKVNLTEFANRTAGTLAYGQQRRLEIARCMMTQPRIIMLDEPAAGL 184

Query: 222 NVEEKQDMCRFILDVNDQFGTTIVLIEHDMGVVMDISDRVVVLDYGKKIGDGTPEEVMGN 281
           N +E +D+   I  + +    T++LIEHDM +VM ISD +VV++ G  +  GTPE++  N
Sbjct: 185 NPKETEDLKALIAYLRESHNVTVLLIEHDMKLVMSISDHIVVINQGTPLAHGTPEQIRDN 244

Query: 282 EDVIKAYLG 290
            DVIKAYLG
Sbjct: 245 PDVIKAYLG 253