Pairwise Alignments

Query, 293 a.a., branched-chain amino acid ABC transporter ATP-binding protein from Herbaspirillum seropedicae SmR1

Subject, 270 a.a., Branched-chain amino acid transport ATP-binding protein LivG (TC 3.A.1.4.1) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  229 bits (583), Expect = 7e-65
 Identities = 113/252 (44%), Positives = 170/252 (67%)

Query: 40  EVILDLQNISLSFGGVKALTDISFDVREHEIRAIIGPNGAGKSSMINVINGVYHPQKGRI 99
           +++L  +N+S+ FGGV A+ ++SFDV+  E+  +IGPNGAGK+++ N+I+ +Y P  G +
Sbjct: 4   DILLSARNLSVRFGGVLAVNNVSFDVKRGEVFTLIGPNGAGKTTVFNLISRIYTPTSGTL 63

Query: 100 LYRGQPRAGMHPSAIARQGIARTFQNIALFKGMTVLDNIMTGRNTKMRSGLLSNAMWWGA 159
            + GQ    + P  +A  GIARTFQNI LF+  TVL N++ GR+ + R+ +   A++   
Sbjct: 64  AFDGQALNAVPPHEVALLGIARTFQNIELFEHATVLQNLLIGRHIRRRTSVWREALFGPG 123

Query: 160 ARNEEIEHRRKVEQVIDFLEIQHIRKTPVGRLPYGLQKRVELARALAAEPHMLLLDEPMA 219
            R  E E R KVE+VID L++QH R + V  LPYG++K VELARAL   P +LLLDEP +
Sbjct: 124 VRAAERETRAKVEEVIDMLDLQHHRDSLVAGLPYGVRKVVELARALCMSPKLLLLDEPSS 183

Query: 220 GMNVEEKQDMCRFILDVNDQFGTTIVLIEHDMGVVMDISDRVVVLDYGKKIGDGTPEEVM 279
           G+N EE  DM  +I D+    G T++++EHDMG+V  +SDRV+ ++ G+ I  G P +V 
Sbjct: 184 GLNSEETGDMAFWIQDIVRDLGITVLMVEHDMGLVSRVSDRVLAMNQGEVIAVGAPADVQ 243

Query: 280 GNEDVIKAYLGT 291
            +  V++AYLG+
Sbjct: 244 SHPAVVEAYLGS 255