Pairwise Alignments

Query, 628 a.a., ABC transporter permease from Herbaspirillum seropedicae SmR1

Subject, 286 a.a., ABC transporter permease from Pseudomonas simiae WCS417

 Score =  204 bits (518), Expect = 5e-57
 Identities = 119/294 (40%), Positives = 173/294 (58%), Gaps = 17/294 (5%)

Query: 9   QLLNGLADASAMFMVAAGLSLIFGVTRIVNFAHGSFYMLGLYLAYSLVDRLGATPWGYWA 68
           Q+LNGL      F+++ GL++IFG+   VNFAHG+F++LG Y+ Y+ V   G     +W 
Sbjct: 8   QILNGLGLGMIYFLISVGLTIIFGLLNFVNFAHGAFFLLGAYICYTAVSLTG----NFWL 63

Query: 69  ALLLAALPVAALGALVELTILRRIYRAPELFQLLATFALVLVIKDAALWYWGPEDLFGPR 128
           ALL+A L VAAL  ++E  +++RIY  P +FQ+L T  + L+I++A++  WGP       
Sbjct: 64  ALLIAPLVVAALAWVIERVLIQRIYHLPHMFQILVTLGIALIIQEASVMIWGPVGK-SVA 122

Query: 129 APGLAGAVQVLGRRL-PQYDLLLMAIGPLVFALLWLLLNRTRWGALIRAATQDREMLGAL 187
            P L   V V+G  + P Y L L+    LV   LWLLL RTR+GAL+RA ++  E +  L
Sbjct: 123 VPELLRGVLVVGDFVYPYYRLFLIVFSGLVGLGLWLLLERTRFGALVRAGSESTETVSLL 182

Query: 188 GVNQAWLFTGVFALGCFLAGLGGALQGPRLPANLALDLDTIGTAFVVVVVGGMGSIGGAF 247
           G N   LF+  FALG  LAG+ G L  P   A   +  + +G AFVVVV+GGMGS  GA 
Sbjct: 183 GTNIFRLFSMTFALGVALAGVAGVLFAPLRGAQPFVGPEILGVAFVVVVIGGMGSFSGAL 242

Query: 248 AAAVLIAEVKALCIALGTVSCFGIELSLSRLTLVAEFLVMAVILVVRPWGLLGK 301
              +L+  V++L   + T+   G  L +        +  MAV+++VRP+GL G+
Sbjct: 243 VGGLLVGVVQSL---MTTLWPQGASLMI--------YGAMAVVILVRPYGLFGR 285