Pairwise Alignments

Query, 1121 a.a., alpha-amylase from Herbaspirillum seropedicae SmR1

Subject, 1115 a.a., alpha-amylase from Pseudomonas simiae WCS417

 Score = 1359 bits (3518), Expect = 0.0
 Identities = 669/1115 (60%), Positives = 823/1115 (73%), Gaps = 37/1115 (3%)

Query: 3    FTRDPLWYKDAVIYQIHVKSYFDANDDGIGDFAGLIQKLDYITGLGVNTIWLLPFYPSPR 62
            F +DPLWYKDAVIYQ+HVKSYFD+N+DGIGDF GLI KLDYI  LGVNTIWLLPFYPSPR
Sbjct: 10   FIKDPLWYKDAVIYQVHVKSYFDSNNDGIGDFPGLIAKLDYIADLGVNTIWLLPFYPSPR 69

Query: 63   RDDGYDISEYKNVHPDYGNMSDVRRFIAAAHEHGLRVITELVINHTSDQHPWFQRARRAR 122
            RDDGYDI+EY+ VH DYG M+D +RFIA AH+ GLRVITELVINHTSDQHPWFQRAR+A+
Sbjct: 70   RDDGYDIAEYRGVHSDYGTMADAKRFIAEAHKRGLRVITELVINHTSDQHPWFQRARKAK 129

Query: 123  PGSVARNFYVWSDDDKSYADTRIIFVDTEKSNWTWDPVAKAYFWHRFYSHQPDLNFDNPH 182
            PGS AR+FYVWSDDD+ Y  TRIIF+DTEKSNWTWDPVA  YFWHRFYSHQPDLNFDNP 
Sbjct: 130  PGSAARDFYVWSDDDQKYDGTRIIFLDTEKSNWTWDPVAGQYFWHRFYSHQPDLNFDNPQ 189

Query: 183  VLKAVLNVMSFWLDLGIDGLRLDAVPYLIEREGTSNENLPETHAILKRIRAEMDSKYPDR 242
            V+KAVL+VM +WLD+GIDGLRLDA+PYLIER+GT+NENLPETH +LK+IRAE+D+ YPDR
Sbjct: 190  VMKAVLSVMRYWLDMGIDGLRLDAIPYLIERDGTNNENLPETHDVLKQIRAEIDAHYPDR 249

Query: 243  MLLAEANMWPEDVQQYFG-----DSDECHMAFHFPLMPRMYMALASQDRFPITDILRQTP 297
            MLLAEAN WPED Q YFG     D DECHMAFHFPLMPRMYMALA +DRFPITDILRQTP
Sbjct: 250  MLLAEANQWPEDTQLYFGDKKGDDGDECHMAFHFPLMPRMYMALAQEDRFPITDILRQTP 309

Query: 298  DIPADCQWAIFLRNHDELTLEMVTDAERDYLWNHYAPDRRARINLGIRRRLAPLVERDWR 357
            +IPA+CQWAIFLRNHDELTLEMVTD ERDYLWN+YA DRRARINLGIRRRLAPL+ERD R
Sbjct: 310  EIPANCQWAIFLRNHDELTLEMVTDKERDYLWNYYAADRRARINLGIRRRLAPLMERDRR 369

Query: 358  RIQLLNSFLLSMPGTPVIYYGDEIGMGDNIHLGDRDGVRTPMQWTPDRNGGFSRVDPARL 417
            R++LLNS LLSMPGTP +YYGDEIGMGDNI+LGDRDGVRTPMQW+ DRNGGFSR DPA L
Sbjct: 370  RVELLNSLLLSMPGTPTLYYGDEIGMGDNIYLGDRDGVRTPMQWSIDRNGGFSRADPASL 429

Query: 418  VLPLLMDPQYGYQTINVEAQSADRHSMLNWMRRLLNVRKQHQAFGRGSLALVYPSNRKIF 477
            VLP +MDPQYGY ++NVE Q+ D HS+LNW RR+L VRKQ +AFGRGSL ++ PSNR+I 
Sbjct: 430  VLPPIMDPQYGYPSVNVETQAQDPHSLLNWTRRMLAVRKQSKAFGRGSLKMLSPSNRRIL 489

Query: 478  AYLREFTDPRPGGATETILCVANVSQSAQAVELDLSAFAGRIPIEMMGGAAFPPIGQLNY 537
            AY REFT     G  E ILCVANVS+SAQA ELDLSAFAG +P+EM+GG AFPPIGQLN+
Sbjct: 490  AYTREFTG--EDGRNEIILCVANVSRSAQAAELDLSAFAGMVPVEMLGGNAFPPIGQLNF 547

Query: 538  LLTLPPFGFYWFLLAPEANMPSWRAPTPEPLPEYVTLVLRKGVQEIMEPPARKLLEQEVL 597
            LLTL P+GFYWF+LAPE  MPSW     + +P++ TLVL+K ++E+++ P R  LEQ VL
Sbjct: 548  LLTLAPYGFYWFVLAPENQMPSWHVEPAQSMPDFTTLVLKKRMEELLDEPCRASLEQTVL 607

Query: 598  PHYLLKRRWYAGKQRQIDKVEMREATTLPMSRTRPGALPIVLTEIDVHSSGTEGDAGAGS 657
            P +L KRRW+AGK   ID V +         R      P++L+E++V           G 
Sbjct: 608  PAWLPKRRWFAGKDTAIDSVRIAYGV-----RFGDPQHPVLLSELEV--------TAGGQ 654

Query: 658  VQRYLLPLGFIREEDTVSALPHQLALSRVRRGRNVGFLTDAFALDSFIVAVLELLADSAS 717
            V RY LP GF+ E+   SALP QLAL+RVRR R VG +TDAF+L+ F+  V++ L     
Sbjct: 655  VSRYQLPFGFLGEDQFTSALPQQLALARVRRVRQVGLVTDAFSLEHFVRTVIQGLQAGTL 714

Query: 718  IKTRSGQLRCIPTAAFDPAILTTALELRRITQEQSNSSVVINNVMMMKVLRQVNPGIHPE 777
            + T  G+LR   T       L    E+R ++ EQSNSSVV+   +++K++R+V  G+HPE
Sbjct: 715  LNTHEGELRFAATPHLAKLQLADESEVRYLSAEQSNSSVVVGECLVLKLIRKVASGVHPE 774

Query: 778  IEMGRYLTERGFANVAATLGEVVRVADDGTPYALIVLQRYVDNQGDAWQWSMDTLERAIQ 837
            +EM  YLTE G+ N++  LG ++R   +G    L++ Q Y+ NQGDAW W+ + LERAI+
Sbjct: 775  LEMSAYLTEAGYPNISPLLGSMIRHDAEGQDNLLMIAQGYLSNQGDAWGWTQNNLERAIR 834

Query: 838  ---SEALDESQRQPNTRPQDAQGIDDNSALVELVTFSRLLGQRLGEMHSLLGQPSDDPAF 894
               +EA+ E ++  N             AL EL  F+ LLGQRLGEMH +LG  + +  F
Sbjct: 835  DELAEAMSEQEQHYN-------------ALGELADFAGLLGQRLGEMHRVLGAKTTNKDF 881

Query: 895  DPQTIGEPVWRSWAQGAAQQLEAALDILRQKEEWPDAAEAHHAARLLAQRERLLERIHPL 954
             P+       ++WA+    QL+ AL +L+  +   + A+    + +LAQ++ +   +  L
Sbjct: 882  KPEVTTVKDTQAWAKDVGAQLDRALQLLKLHQSQLNLADQALVSEMLAQKKAIASHVQAL 941

Query: 955  AQAAEGSLAMRLHGDLHLGQVLIAFNDVYIVDFEGEPARPLEQRRAKGSPLRDVAGLLRS 1014
            A+A  G L +R+HGDLHLGQVL+   D Y++DFEGEPARPL +RR K SP +DV+G+LRS
Sbjct: 942  AKATAGGLRIRVHGDLHLGQVLVVKGDAYLIDFEGEPARPLHERRGKHSPYKDVSGVLRS 1001

Query: 1015 FDYAAAFGHTMGPTDLDEAALASKKQILQRFAPACQAALLEGYRLGNPLLEQS-LPLDAQ 1073
            FDYAAA    +   D    A  ++K++  R+    + A ++ Y+     L         Q
Sbjct: 1002 FDYAAAMALNVQGVDHSPEADQARKRVTDRYLKEARQAFIQAYQSATSTLAHDWQDAKGQ 1061

Query: 1074 ALLLDLFTLEKAAYEICYEAANRPTWMHVPLRGLY 1108
               L LF+LEKAAYE+ YEA NRPTW+ VPL+GL+
Sbjct: 1062 DAALTLFSLEKAAYEVAYEAENRPTWLPVPLQGLH 1096