Pairwise Alignments

Query, 451 a.a., ABC transporter substrate-binding protein from Herbaspirillum seropedicae SmR1

Subject, 592 a.a., terpene utilization protein AtuA from Pseudomonas simiae WCS417

 Score =  250 bits (638), Expect = 1e-70
 Identities = 163/453 (35%), Positives = 237/453 (52%), Gaps = 17/453 (3%)

Query: 7   RKVRIGAGAGYSGDRIEPAAELAERGELDYLIFECLAERTIAIGQQARLADPTKGYDPLL 66
           + VRIG  + + GD    AA+L   G+LDYL+F+ LAE T++I   AR+ DP  GY    
Sbjct: 3   KTVRIGCASAFWGDTCTAAAQLVHGGKLDYLVFDYLAEVTLSILAGARMKDPQAGYATDF 62

Query: 67  AERMHAVLKTCADKGVRIITNMGAANPAAAAQRVREIARTLGLAHLKVAAVTGDDVL-QA 125
            E +  +L     +G+R+I+N G  +P A A  ++      G+  L +A + GDD+L Q 
Sbjct: 63  VEVLTPLLADIQRQGIRVISNAGGIHPQACAAALQAACDKAGIK-LNIAVLLGDDLLPQL 121

Query: 126 VQEGDFRIEDNGQPVSSLGERLISANAYLGVAPILEALQAGADVIITGRVADPALVLAPL 185
            Q        NG P+  +    +SANAYLG   I +AL  GAD++ITGRV D A+V A L
Sbjct: 122 KQLHGITDMFNGTPLPPV---CVSANAYLGAPGITQALALGADIVITGRVVDSAVVSAAL 178

Query: 186 VHEFGWAADDWDKLGQGTLVGHLLECAGQITGGYFADPGKKDVAGLARLGFPIGEVSADG 245
           VHEF W+  D+D+L Q  L GH++EC  Q TGG F D   +DV     +GFPI EV ADG
Sbjct: 179 VHEFNWSWQDYDRLAQAALAGHIIECGAQCTGGNFTD--WRDVPDYEHIGFPIVEVGADG 236

Query: 246 SAVITKVAGSGGQVTAQTCKEQLLYEIHDPSAYYTPDVVADFSQVQITEIGPDRVAVSGG 305
              + KV G+GG ++  +  EQLLYEI DP AY  PDV+ DFSQV++ + G + V + G 
Sbjct: 237 QFTVGKVDGTGGLISELSVAEQLLYEIGDPRAYLLPDVICDFSQVKLQQQGKNCVRLHGA 296

Query: 306 RGRARPATLKTTLGYRDSFIGEGQISYAGPGAQARAQLAAEIV----RERLALTG-VETD 360
           RG       K +  Y D F        AG  A A+A+  ++ +     E  +  G     
Sbjct: 297 RGLPPTDQYKVSATYPDGFRCTASCLIAGIDAVAKAERVSQAIIHKTSELFSQRGWAPYT 356

Query: 361 ELRLDLIGMNAIAGPQMSAGAPEPYEVRLRVSGRTASMQQAVRIGNEVETLYTN---GPA 417
           E+ ++L+G  A  G    A   +  EV ++++ R  S Q  V    E+    T    G  
Sbjct: 357 EVNIELLGSEATYGAH--AKRQDCREVVVKLAVRHPSKQALVLFAREIAQAATGMAPGLT 414

Query: 418 GGGGATKSAREVIAVLSLLLPRSLVHPSVHIEE 450
           G  G   +   +I + S L+ +S     + +++
Sbjct: 415 GIVGGRPTVYPLIRLFSFLIDKSACQLLIDLQD 447