Pairwise Alignments

Query, 267 a.a., flagellar biosynthesis protein FliR from Herbaspirillum seropedicae SmR1

Subject, 258 a.a., Flagellar biosynthetic protein fliR from Pseudomonas putida KT2440

 Score =  187 bits (475), Expect = 2e-52
 Identities = 94/258 (36%), Positives = 155/258 (60%), Gaps = 1/258 (0%)

Query: 1   MLTFSSQQLYVWVAMFIWPTTRILGLMAIAPPFGSASVPMLVKVLLGVAIGAVIAPDVPI 60
           ML  +  Q+  WVA FI P  R+  ++   P FG+  +P  +++ + VA+  VI P +P 
Sbjct: 1   MLELTDTQIGTWVATFILPLFRVTAVLMTMPIFGTRMLPARIRLYVAVAVTVVIVPALPP 60

Query: 61  PPAIEPTSMTGIMILLQQLLIGLSMGFAMRIVFAAVEAAGEFTSTTMGLSFAAFFDPQTQ 120
            P  +P S+ G+++  +Q+++G   G A++++F A   AG+  +  MG++FA+  DP   
Sbjct: 61  LPEFDPLSLRGMLLCAEQIIVGALFGLALQLLFQAFVVAGQIVAVQMGMAFASMVDPANG 120

Query: 121 GRTAVISQVFSLLATMVFLNLNGHLILLQVMAESFHTLPITGQPITTEGFHQLVLWGAKI 180
               VISQ  ++L +++FL +NGHL++ +V+ ESF TLP+ G  +    F +L      +
Sbjct: 121 VNVTVISQFMTMLVSVLFLLMNGHLVVFEVLTESFTTLPV-GSALVVNHFWELAGRMGWV 179

Query: 181 FSMGLQLSLPLLIALLITNFALGVLTRAAPQLNLFGIGFSITMLAGFILIGITLPYMLTP 240
           F  GL L LP++ ALL+ N A GV+TRAAPQLN+F IGF +T++ G  +  + L  +L+ 
Sbjct: 180 FGAGLLLILPVIAALLVVNIAFGVMTRAAPQLNIFSIGFPLTLVMGMFIFWVGLADVLSH 239

Query: 241 VQKLLSDGVEMVRLLGSV 258
            Q L S+ ++ +R L  V
Sbjct: 240 YQALASETLQWLRELARV 257