Pairwise Alignments

Query, 358 a.a., glycoside hydrolase family 43 from Herbaspirillum seropedicae SmR1

Subject, 323 a.a., efflux RND transporter periplasmic adaptor subunit from Serratia liquefaciens MT49

 Score = 92.8 bits (229), Expect = 1e-23
 Identities = 81/299 (27%), Positives = 133/299 (44%), Gaps = 19/299 (6%)

Query: 9   LFAGLLLVVLAAVGWTGWAWWRDADAPAGLVSSNGRLEATEVDIGSRLGGRIRHMLVDEG 68
           LF  LL+VV  A+     A  +D       +   G ++A EV + S+  GR+   LV+ G
Sbjct: 6   LFTLLLMVVAIAMAILFRAHNQD-------LLLQGEVDAPEVIVASKAKGRVIERLVERG 58

Query: 69  EAVQAGQVLAYLQVDSLHAQLREARAQQQRASQGVTVAQAQLAMRRSEQRIAQALTVQRH 128
           + VQAGQV+ +L    L AQLR A+A +  A     + Q+    R    R  +A   Q  
Sbjct: 59  DDVQAGQVMIHLDSPELMAQLRSAQASRDEAK--AQLEQSLHGTREESIRNLRANLAQSE 116

Query: 129 KSLSAATRRVERSQPLGRMQALTAQEVDDEENTLAEARAQLDAAQAQEE----GARAAIR 184
                A     R+  +     ++  E+D        A  Q+ AA+A  +    G R  +R
Sbjct: 117 AQYRNAQNDYNRNLSVAGKGYISKSELDASRRARDTAFQQVQAAKANLDEGINGDRVELR 176

Query: 185 AAEADVASARALLEAAQAATARIEADLEESAIRAPRDGHIQYRLAQAGEVVSEGSKLLNL 244
              A      A L AA+    +++A  ++  + AP  G +    A+ GE+++ GS LL L
Sbjct: 177 QQYA------AALRAAEENLLQVKAQTDDLQVLAPVTGEVGPIPAEVGELLNAGSPLLTL 230

Query: 245 IDLSDLHMHFFLPAELAGKVRLGQEVRVVLDAAPTDALPARITYVSRQAQFTPKAVETA 303
           I + D +  F L  ++   VR G +V++ + A     + A + Y++    +  K    A
Sbjct: 231 IRIPDAYFVFNLREDILAHVRKGDKVQMRVPALKDKMIEAEVRYIAPLGDYATKRATRA 289