Pairwise Alignments

Query, 358 a.a., glycoside hydrolase family 43 from Herbaspirillum seropedicae SmR1

Subject, 331 a.a., Predicted membrane fusion protein (MFP) component of efflux pump, membrane anchor protein YbhG from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  136 bits (342), Expect = 9e-37
 Identities = 103/336 (30%), Positives = 173/336 (51%), Gaps = 23/336 (6%)

Query: 5   LQHPLFAGLLLVVLAAVGWTGWAWWRDADAPAGLVSSNGRLEATEVDIGSRLGGRIRHML 64
           ++ P+  GL +  + AV   G  WW  +    GL +  G ++   V+I  R+GGR+  + 
Sbjct: 1   MKKPVVIGLAIAAIVAV-IAGGTWWYQSRQDDGL-TLYGNVDIRTVNISFRVGGRLASLN 58

Query: 65  VDEGEAVQAGQVLAYLQVDSLHAQLREARAQQQRASQGVTVAQAQ----LAMRRSEQRIA 120
           VDEG+ ++AGQVL  L     HA    A  Q   A  GV+VAQAQ    LA  R E+ IA
Sbjct: 59  VDEGDTIKAGQVLGELD----HAPYENALMQ---AKAGVSVAQAQYDLMLAGYRDEE-IA 110

Query: 121 QALTV--QRHKSLSAATRRVERSQPLGRMQALTAQEVDDEENTLAEARAQLDAAQAQEEG 178
           QA     Q   +   A     R Q L + + ++A ++++  ++  +A+A L +AQ +   
Sbjct: 111 QAAAAVRQAQAAYDYAQNFYNRQQGLWKSRTISANDLENARSSRDQAQATLKSAQDKLSQ 170

Query: 179 ARAAIRAAEADVASARALLEAAQAATARIEADLEESAIRAPRDGHIQYRLAQAGEVVSEG 238
            R   R  E D+A A+A LE A+A  A+ + DL+++ + AP +G +  R  + G +++ G
Sbjct: 171 YRTGNR--EQDIAQAKASLEQAKAQLAQAQLDLQDTTLIAPANGTLLTRAVEPGSMLNAG 228

Query: 239 SKLLNLIDLSDLHMHFFLPAELAGKVRLGQEVRVVLDAAPTDALPARITYVSRQAQFTPK 298
           S +L L     + +  ++      + + G+++ +  D  P      +I +VS  A+FTPK
Sbjct: 229 STVLTLSLTRPVWVRAYVDERNLSQTQPGRDILLYTDGRPDKPYHGKIGFVSPTAEFTPK 288

Query: 299 AVETANERQKLMFRVKAQLTPSSRGSIAPHLKAGMP 334
            VET + R  L++R++  +T +        L+ GMP
Sbjct: 289 TVETPDLRTDLVYRLRIIVTDADDA-----LRQGMP 319