Pairwise Alignments

Query, 358 a.a., glycoside hydrolase family 43 from Herbaspirillum seropedicae SmR1

Subject, 355 a.a., Putative membrane protein from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  302 bits (773), Expect = 1e-86
 Identities = 161/354 (45%), Positives = 234/354 (66%), Gaps = 8/354 (2%)

Query: 1   MNRSLQHPLFAGL-LLVVLAAVGWTGWAWW--RDADAPAGLVSSNGRLEATEVDIGSRLG 57
           M++  +H ++ G  +LV +AA+     AWW  R A  P G  +SNGR+EATEVDI +++ 
Sbjct: 1   MDKMKRHLVWWGAGILVAVAAI-----AWWMLRPAGIPEGFAASNGRIEATEVDIATKIA 55

Query: 58  GRIRHMLVDEGEAVQAGQVLAYLQVDSLHAQLREARAQQQRASQGVTVAQAQLAMRRSEQ 117
           GRI  +LV EG+ V+ G+VLA +    L  Q  EA AQ + A   V  A+A L  R+SE 
Sbjct: 56  GRIDTILVSEGQFVRQGEVLAKMDTRVLQEQRLEAIAQIKEAESAVAAARALLEQRQSEM 115

Query: 118 RIAQALTVQRHKSLSAATRRVERSQPLGRMQALTAQEVDDEENTLAEARAQLDAAQAQEE 177
           R AQ++  QR   L + ++R  RS+ L +  A++ Q++DD+      ARA L+ A+AQ  
Sbjct: 116 RAAQSVVKQREAELDSVSKRHVRSRSLSQRGAVSVQQLDDDRAAAESARAALETAKAQVS 175

Query: 178 GARAAIRAAEADVASARALLEAAQAATARIEADLEESAIRAPRDGHIQYRLAQAGEVVSE 237
            A+AAI AA   +  A+  +EAAQA   RI AD+++S ++APRDG +QYR+A+ GEV+S 
Sbjct: 176 AAKAAIEAARTSIIQAQTRVEAAQATERRIVADIDDSELKAPRDGRVQYRVAEPGEVLSA 235

Query: 238 GSKLLNLIDLSDLHMHFFLPAELAGKVRLGQEVRVVLDAAPTDALPARITYVSRQAQFTP 297
           G ++LN++DLSD++M FFLP E AG +++G E R+VLDAAP   +PA I++V+  AQFTP
Sbjct: 236 GGRVLNMVDLSDVYMTFFLPTEQAGLLKIGGEARLVLDAAPDLRIPATISFVASVAQFTP 295

Query: 298 KAVETANERQKLMFRVKAQLTPSSRGSIAPHLKAGMPGVAWIKTAEQLPWPKTL 351
           K VET +ER KLMFRVKA++ P        ++K G+PG+AW++  E++PWP  L
Sbjct: 296 KTVETHDERLKLMFRVKARIPPELLRQHLEYVKTGLPGMAWVRLDERVPWPDAL 349