Pairwise Alignments

Query, 237 a.a., membrane protein from Herbaspirillum seropedicae SmR1

Subject, 207 a.a., membrane protein from Pseudomonas simiae WCS417

 Score =  106 bits (265), Expect = 3e-28
 Identities = 68/207 (32%), Positives = 107/207 (51%), Gaps = 6/207 (2%)

Query: 29  LSALVVAGAITITALTPGRASAAALDQFKQFVSSTQSAKGAFTQRMVRTENGATKVVNTS 88
           L  +++  A+ +TA++   A  A++   K  +  +Q+    F+Q  +  + G T++  T+
Sbjct: 3   LIRMLLLPALALTAVS-AHADPASVASLKNLLDKSQTLTARFSQ--LTLDAGGTQLQETA 59

Query: 89  SGSFVFSRPGKFIWTYQKPYEQVIQADGEKLFIYDKDLNQVTTKKLGNALGSSPAAILFG 148
            G     RPG F W  +   EQ I +DG+K+ ++D DL Q T KKL   L  +PA +L G
Sbjct: 60  -GEMAVQRPGLFYWHTEGKAEQTIVSDGQKVTLWDPDLQQATIKKLDPRLNQTPALLLSG 118

Query: 149 S-NDLEKNFTLKEAGDKDGLEWLEAVPKSKDTTFDRIGIGLKNGTPVAMELHDSFGQVSL 207
             + +  +F +      + +E+    PKSKDT FD + +   NG    M L DS GQ + 
Sbjct: 119 DVSKINDSFDITSKQTSNVIEFT-LKPKSKDTLFDTLSLSFGNGVINNMRLVDSVGQRTD 177

Query: 208 LSFDSFEKNPPLKVNSFSFTIPKGADV 234
           + F   + N P+    F F IPKGADV
Sbjct: 178 ILFSGVKANQPVPAAKFKFDIPKGADV 204