Pairwise Alignments

Query, 237 a.a., membrane protein from Herbaspirillum seropedicae SmR1

Subject, 203 a.a., Outer membrane lipoprotein carrier protein LolA from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score = 56.2 bits (134), Expect = 5e-13
 Identities = 49/217 (22%), Positives = 94/217 (43%), Gaps = 21/217 (9%)

Query: 20  LRRRLMAAGLSALVVAGAITITALTPGRASAAALDQFKQFVSSTQSAKGAFTQRMVRTEN 79
           +++  +A  L + VVA ++           A A    K  +    S    FTQ++    +
Sbjct: 1   MKKMAIACALLSSVVASSVW----------ADAASSLKSRLDKVSSFHATFTQKVT---D 47

Query: 80  GATKVVNTSSGSFVFSRPGKFIWTYQKPYEQVIQADGEKLFIYDKDLNQVTTKKLGNALG 139
           G+   V    G     RP  F W   +P E ++ +DG+ L+ Y+  + Q T   L +A G
Sbjct: 48  GSGAAVQEGQGDLWVKRPNLFNWHMTQPDESILVSDGKTLWFYNPFVEQATATWLKDATG 107

Query: 140 SSPAAILFGSNDLE-KNFTLKEAGDKDGLEWLEAVPKSKDTTFDRIGIGL-KNGTPVAME 197
           ++P  ++  +   + + + +K+ GD   L      PK+ +    +  I + ++GT     
Sbjct: 108 NTPFMLIARNQASDWQQYNIKQDGDNFVL-----TPKASNGNLKQFTINVGRDGTIHQFS 162

Query: 198 LHDSFGQVSLLSFDSFEKNPPLKVNSFSFTIPKGADV 234
             +   Q S     S ++N  +  + F+FT P+G  +
Sbjct: 163 AVEQDDQRSAYQLKS-QQNGAVDPSKFTFTPPQGVTI 198