Pairwise Alignments

Query, 237 a.a., membrane protein from Herbaspirillum seropedicae SmR1

Subject, 224 a.a., hypothetical protein from Agrobacterium fabrum C58

 Score = 42.4 bits (98), Expect = 8e-09
 Identities = 29/121 (23%), Positives = 47/121 (38%), Gaps = 8/121 (6%)

Query: 1   MDNSRNASRLRAAQAPASTLRRRLMAAGLSALVVAGAITITALTPGRASAAALDQFKQFV 60
           M++        A+       RR ++ A   A V+AG   + A      + A   +     
Sbjct: 1   MNDLTTGETANASTTQNGVTRRGVLTAFSMAAVIAGLSPLNAFAQAAGNGATAQKIANHF 60

Query: 61  SSTQSAKGAFTQRMVRTENGATKVVNTSSGSFVFSRPGKFIWTYQKPYEQVIQADGEKLF 120
           SS ++  G F Q   R E         + G F   RPGK  + Y+ P    + +DG+ + 
Sbjct: 61  SSVKTMMGEFVQFGPRGEQ--------TGGKFYIERPGKLRFNYEDPSPMRVISDGKNVV 112

Query: 121 I 121
           I
Sbjct: 113 I 113