Pairwise Alignments

Query, 832 a.a., ABC transporter permease from Herbaspirillum seropedicae SmR1

Subject, 836 a.a., ABC transporter permease from Pseudomonas simiae WCS417

 Score =  549 bits (1415), Expect = e-160
 Identities = 321/842 (38%), Positives = 488/842 (57%), Gaps = 24/842 (2%)

Query: 1   MFQQALRMTWRDWRTGELRFLLIALIVAVASLSSVGFFVDRMRAGMTRDAHQLLGADLLV 60
           +F  A+R   RD R GELR L  AL+VAVA+ +++G+F  R+   M   A + LGADL++
Sbjct: 9   LFSLAMRQLLRDARAGELRVLFFALLVAVAASTAIGYFGARLNGAMLLRATEFLGADLVL 68

Query: 61  AADQPLPPQWMQRAAAQGLQQAQTQVFPSMAQAGEGDAARAVLASIKAVTAGYPLRGQLR 120
               P  P+ ++     GL  A+   F S+     G      L+SIKAV   YPLRG+L+
Sbjct: 69  EGSSPARPEQIRSGTELGLDHARIVEFSSVIATDNG----IQLSSIKAVNEQYPLRGELK 124

Query: 121 LQTAS-GADRPAEGIPQPGTVWVDPQILSQLDVRVGDTLKLGDLPLKIAAVIAVEPDRGS 179
              A  GA+ P  G P+PG  WV+ ++L+ LD++VGD++ +G   L++A V+  EPDR  
Sbjct: 125 SAAAPFGAETPGGG-PKPGEAWVEARLLTALDLKVGDSIDVGMKTLRLARVLTYEPDRAG 183

Query: 180 AFVNFAPRVMLGEADLAATHLVQVGSRVTYRLLLAGP--APVVKQFQQELERQIEADKLR 237
            F +  PRVM+  ADL AT +VQ GSRV+YR L  GP  + V++ ++  ++  + A++  
Sbjct: 184 NFYSLTPRVMINLADLDATGVVQPGSRVSYRELWRGPQGSTVLQTYRDLVKPGLAANQ-- 241

Query: 238 GVRLESLENGRPEMRATLDRAEQFLSLVGLLSAMLAALAVAMAARRFMLRHLDACAMLRC 297
             RL+   +G  ++   L +AE++L++  L++ +LA +AVA++A RF  R  DA A+LRC
Sbjct: 242 --RLQDSRDGNQQIGGALGKAERYLNMASLVAVLLAGVAVALSANRFATRRFDASALLRC 299

Query: 298 FGLTQAQVTRLYLGEFMLVGLAASVLGMLIGYAAHFALLQWLGNFMPTALPPAGWQPAVQ 357
            GL++ +   L+  +  ++GL AS+ G ++G+ A F L  +L + +P  +PP G  PA+ 
Sbjct: 300 LGLSRREAMLLFSLQLSVLGLLASLTGAVLGWLAQFGLFYFLHDLLPADVPPGGLLPAIA 359

Query: 358 GVAAGLLLLLGFALPPILQLRNVPHNRVIRRDQLTPQPLTVATYGLGTLVFSGLLLWQAG 417
           G+  GL+ L GFALPP+  L  VP  RV+RRD L     T   YG   L   GL++W+  
Sbjct: 360 GIGTGLVALAGFALPPLAALGRVPPLRVLRRDMLPIPSSTWMVYG-AALFALGLIMWR-- 416

Query: 418 DLKLGLLTIAGFLGGFGLFALV-AWLCLRALRSLRGLVDRQS--WRFAIDGLQRRPAAAV 474
            L L L+     LGG  + AL+   L L  L+SLR L+ R S  WR  +  L R P AA 
Sbjct: 417 -LSLDLVLTFALLGGGVVAALILGGLLLLLLQSLRRLLARASLPWRLGLGQLLRHPLAAA 475

Query: 475 MQVVALGLGLMALLLLTVIRGDLVGAWRQATPADAPNRFIINIQPDQRQAVEQLLRQGGV 534
            Q +A GL L+++ L+ ++RG+L+  W+   P DAPN F +NI P  + A    L +   
Sbjct: 476 GQSLAFGLILLSMGLIALLRGELLDTWQNQLPKDAPNYFALNILPADKDAFGARLLELQA 535

Query: 535 GDVALYPMIRGRLVQINGRAISAADYAEDRAKRLVDREFNLSTLREIPPGNGIVAGRWYD 594
               LYP++ GRL+ ING  +      +    R V R+ +L+   E+PPGN + AG W+ 
Sbjct: 536 QSAPLYPVVPGRLISINGEPVQEIVSKDSSGDRAVQRDLSLTWAAELPPGNALTAGSWWS 595

Query: 595 ----DRQPEASVERGLAQTLGIKLGDRLQFDIAGQLVEAPVTSLRKLEWGSLRVNFFVIL 650
               D  P  SVE  +A++L +KL D L F + G+  EA VTSLR + W + + NFF+I 
Sbjct: 596 QQPTDEVPGVSVEAKVAESLKLKLDDHLVFTVGGENREARVTSLRTINWDNFQPNFFMIF 655

Query: 651 NPTLMRDTPQSWITAVHLNPQQEALGNTLTRDYPNLTVVDIGSVLRQIQDVVGQVISAVE 710
            P  ++D P +++T+ +L P  +     L+R +P +T++ + ++L Q++ ++ QV  AVE
Sbjct: 656 QPGTLKDLPTTYLTSFYLAPGHDQQIVDLSRAFPAVTILQVEALLEQLRSILAQVTLAVE 715

Query: 711 FLFLFTLCSGVLVLYAALAGSQDERVREAGLLRALGATRVELARAQRIEVLLVGALAGLL 770
           ++ LF L +G+ VL++ L  + DER+R+  LLRALGA R  L +A+RIE  L+GA++GLL
Sbjct: 716 YVLLFVLAAGMAVLFSGLQATLDERIRQGALLRALGAERKLLVKARRIEFGLLGAVSGLL 775

Query: 771 AASGAAAIGWALAHYVFNFDWSFSPLVWLAGMSLGAACSALGGWAGLRHVLRRPPLQTLR 830
           AA G   + + L  Y F+  W   P + L  + +GA      G  G R  L   PL  LR
Sbjct: 776 AALGTELVTFVLYRYAFDLAWQPHPWLLLLPV-IGAVLIGGAGVFGTRRALNASPLTVLR 834

Query: 831 EG 832
           EG
Sbjct: 835 EG 836